RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 OR4K15Q8NH41 348 aa16.96■□□□□ 0.31
CACNA1A-227ENST00000636549 NARFLQ9H6Q4 476 aa16.96■□□□□ 0.31
CACNA1A-227ENST00000636549 ZNF223Q9UK11 482 aaPredicted RBP16.96■□□□□ 0.31
CACNA1A-227ENST00000636549 SLC9B1P1A6NJY1 282 aa16.96■□□□□ 0.3
CACNA1A-227ENST00000636549 GRB7Q14451 532 aa16.96■□□□□ 0.3
CACNA1A-227ENST00000636549 PKP2Q99959 881 aa16.96■□□□□ 0.3
CACNA1A-227ENST00000636549 FOXQ1Q9C009 403 aa16.96■□□□□ 0.3
CACNA1A-227ENST00000636549 CEBPZOSA8MTT3 80 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 ARL6IP5O75915 188 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SCAF4O95104 1147 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 DEFA4P12838 97 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PORP16435 677 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 OR1D4P47884 311 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 NPBWR1P48145 328 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 HK3P52790 923 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SGTBQ96EQ0 304 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 HES7Q9BYE0 225 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RETREG1Q9H6L5 497 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 GFOD1Q9NXC2 390 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SRRM3A6NNA2 597 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 FAM72CH0Y354 149 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 GABRA5P31644 462 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RFC2P35250 354 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PSMB10P40306 273 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PITPNBP48739 271 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RRAS2P62070 204 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RPS15AP62244 130 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 FAM72AQ5TYM5 149 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 LCN10Q6JVE6 187 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 FAM72DQ6L9T8 149 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 FAM72BQ86X60 149 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 BIRC7Q96CA5 298 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC6A17Q9H1V8 727 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 HRASLSQ9HDD0 168 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PRDM9Q9NQV7 894 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SULT2B1O00204 365 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 IGHV3-9P01782 118 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 GPRIN1Q7Z2K8 1008 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PNPLA1Q8N8W4 532 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 GPN2Q9H9Y4 310 aaPredicted RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 IFNA7P01567 189 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PYCR1P32322 319 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RABIFP47224 123 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 KCNC3Q14003 757 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 ZNF836Q6ZNA1 936 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 OR2T27Q8NH04 317 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 NEIL3Q8TAT5 605 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SPTSSAQ969W0 71 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RSPRY1Q96DX4 576 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 OR6C1Q96RD1 312 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 PLEK2Q9NYT0 353 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 IGSF9Q9P2J2 1179 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SUSD2Q9UGT4 822 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 RBBP9O75884 186 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 C6orf120Q7Z4R8 191 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 GPR149Q86SP6 731 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 DCP2Q8IU60 420 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 OR5AR1Q8NGP9 310 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 MAPKAP1Q9BPZ7 522 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 URM1Q9BTM9 101 aaKnown RBP16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 SLC7A7Q9UM01 511 aa16.95■□□□□ 0.3
CACNA1A-227ENST00000636549 A0A1W2PQ09 198 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 H0YJX3 145 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 ADAMTS4O75173 837 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 PBX2P40425 430 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 BMXP51813 675 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 TPRA1Q86W33 373 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 DPCDQ9BVM2 203 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 DPH1Q9BZG8 443 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 SACM1LQ9NTJ5 587 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 RLIMQ9NVW2 624 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 FRS3O43559 492 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 HOXA1P49639 335 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 HOXC5Q00444 222 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 TMEM44Q2T9K0 475 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 EMC10Q5UCC4 262 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 REEP3Q6NUK4 255 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 KBTBD6Q86V97 674 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 TTC9BQ8N6N2 239 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 MCTS1Q9ULC4 181 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 BCAT2O15382 392 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 EDN1P05305 212 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 CXCL12P48061 93 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 EXOSC7Q15024 291 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 ASCC1Q8N9N2 400 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 CYB561A3Q8NBI2 242 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 OR2T33Q8NG76 320 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 SAMD11Q96NU1 681 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 SNX18Q96RF0 628 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 LPAR4Q99677 370 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 PTBP2Q9UKA9 531 aaKnown RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 ERVK-19Q9WJR5 959 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 MPIG6BO95866 241 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 BMP4P12644 408 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 IL4RP24394 825 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 NFYBP25208 207 aa16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 KCTD18Q6PI47 426 aaPredicted RBP16.94■□□□□ 0.3
CACNA1A-227ENST00000636549 SDR9C7Q8NEX9 313 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms