RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SFRP5Q5T4F7 317 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 FBXL22Q6P050 247 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 LEG1Q6P5S2 330 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PHC2Q8IXK0 858 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TWNKQ96RR1 684 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CHRDQ9H2X0 955 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CWH43Q9H720 699 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PLCXD1Q9NUJ7 323 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OXSMQ9NWU1 459 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 EMC9Q9Y3B6 208 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 AGLP35573 1532 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CBX7O95931 251 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SERPINA5P05154 406 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 FAM163BP0C2L3 166 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SPATA31C1P0DKV0 1188 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 BPIP17213 487 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CD34P28906 385 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 HNRNPA0Q13151 305 aaKnown RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 C1orf61Q13536 156 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR8B8Q15620 311 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ATPAF1Q5TC12 328 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR4C11Q6IEV9 310 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 NAA40Q86UY6 237 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CARM1Q86X55 608 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR52E2Q8NGJ4 325 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR52P1PQ8NH57 321 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PWWP2AQ96N64 755 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TRIB3Q96RU7 358 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 AMBNQ9NP70 447 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SSU72Q9NP77 194 aaKnown RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CD93Q9NPY3 652 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TEX10Q9NXF1 929 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 KIF25Q9UIL4 384 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 MEGF11A6BM72 1044 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 C2orf78A6NCI8 922 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TRAPPC2LH3BP13 241 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SULT2B1O00204 365 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SDC3O75056 442 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 RHCEP18577 417 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 NAA10P41227 235 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ABHD18Q0P651 414 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CST6Q15828 149 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 NNATQ16517 81 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 DEFB134Q4QY38 66 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 RAB41Q5JT25 222 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF529Q6P280 563 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CLEC20AQ6ZU45 233 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM173Q86WV6 379 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 METTL25Q8N6Q8 603 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 NAT6Q93015 286 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 FER1L6-AS2Q96M78 137 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SAMD10Q9BYL1 202 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 RPH3ALQ9UNE2 315 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PHLPP1O60346 1717 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR5K3A6NET4 321 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF705FA8MVS1 300 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 FANCGO15287 622 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 FMO6PO60774 539 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PROS1P07225 676 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF705DP0CH99 300 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF705BP0CI00 300 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PTNP21246 168 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 UGT3A2Q3SY77 523 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 EARS2Q5JPH6 523 aaKnown RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF704Q6ZNC4 412 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 FAM109AQ8N4B1 249 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 DMBX1Q8NFW5 382 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 KREMEN1Q96MU8 473 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CCM2LQ9NUG4 571 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 GPATCH2Q9NW75 528 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 EXTL2Q9UBQ6 330 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 COL5A2P05997 1499 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 NSG1A0A0A6YYJ2 146 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1B0GV50 99 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR51F1A6NGY5 319 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 WNT11O96014 354 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ETFAP13804 333 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 HOXA1P49639 335 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 CAV2P51636 162 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 RABGGTBP53611 331 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 AGAP7PQ5VUJ5 663 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 AGAP6Q5VW22 663 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF367Q7RTV3 350 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 IRF2BP2Q7Z5L9 587 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PIAS4Q8N2W9 510 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR5D14Q8NGL3 314 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR5AK2Q8NH90 309 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 GOT1L1Q8NHS2 421 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-209ENST00000635750 PSMF1Q92530 271 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 TMBIM1Q969X1 311 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 AGAP4Q96P64 663 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OR4K3Q96R72 315 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 DOHHQ9BU89 302 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 BTBD2Q9BX70 525 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 ADAMTS10Q9H324 1103 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 MTG2Q9H4K7 406 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 HRASLSQ9HDD0 168 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 SLC39A9Q9NUM3 307 aa5.29□□□□□ -1.56
SCN1A-209ENST00000635750 OARD1Q9Y530 152 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms