RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SHFQ7M4L6 423 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM151BQ8IW70 566 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 MFSD8Q8NHS3 518 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 COQ8AQ8NI60 647 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 GSTO2Q9H4Y5 243 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 PREBQ9HCU5 417 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 ICKQ9UPZ9 632 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 PCDHGA7Q9Y5G6 932 aa12.15□□□□□ -0.47
SCN8A-209ENST00000627620 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 hCG_1807616A0A1W2PRN6 198 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 KIAA0355O15063 1070 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF888P0CJ79 500 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 OSMP13725 252 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 CEBPBP17676 345 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ERP29P30040 261 aaKnown RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 P2RY2P41231 377 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF791Q3KP31 576 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 EEF1A1P5Q5VTE0 462 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 FAM205BPQ63HN1 556 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ABCG5Q9H222 651 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 COPZ2Q9P299 210 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 CNOT11Q9UKZ1 510 aaKnown RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 LRRTM2O43300 516 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 CPNE6O95741 557 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 PENKP01210 267 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 FASLGP48023 281 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 RHEBQ15382 184 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 HSD11B1LQ7Z5J1 315 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM173Q86WV6 379 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 UEVLDQ8IX04 471 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 OR9A2Q8NGT5 310 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 GGT3PA6NGU5 568 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 PPP1R3DO95685 299 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ITGB7P26010 798 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ART1P52961 327 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 SAMD8Q96LT4 415 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF285Q96NJ3 590 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 FUNDC2Q9BWH2 189 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 KLF16Q9BXK1 252 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF696Q9H7X3 374 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 KCMF1Q9P0J7 381 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 A8MVJ9 347 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 DRD1P21728 446 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 MSX1P28360 303 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 THBS2P35442 1172 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 FOXA1P55317 472 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 RAB11BQ15907 218 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 Q6ZSR6 202 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 DPPA4Q7L190 304 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 PDZD3Q86UT5 571 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 PHC2Q8IXK0 858 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 IL17RCQ8NAC3 791 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 DNAAF1Q8NEP3 725 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 NLGN4YQ8NFZ3 816 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 FRS2Q8WU20 508 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM168Q9H0V1 697 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 NMNAT1Q9HAN9 279 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 SDR39U1Q9NRG7 319 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ACTR10Q9NZ32 417 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 MRPL15Q9P015 296 aaKnown RBP12.14□□□□□ -0.47
SCN8A-209ENST00000627620 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
SCN8A-209ENST00000627620 FGF4P08620 206 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ZNF43P17038 809 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 HOXB9P17482 250 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 IL4RP24394 825 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 MC3RP41968 323 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 NOVP48745 357 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 MICAQ29983 383 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 PAGE3Q5JUK9 113 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ARHGAP12Q8IWW6 846 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 SLC39A11Q8N1S5 342 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 SPRYD4Q8WW59 207 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 C7orf34Q96L11 122 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 CASD1Q96PB1 797 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 CPEB1Q9BZB8 566 aaKnown RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 DMRT3Q9NQL9 472 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ERVK13-1Q9NX77 482 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 SLC7A7Q9UM01 511 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 RNF215Q9Y6U7 377 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 FTCDNL1E5RQL4 147 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 M0R3H8 397 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ACOT7O00154 380 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 DIRAS3O95661 229 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 SERTAD2Q14140 314 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 MLC1Q15049 377 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 DUS1LQ6P1R4 473 aaKnown RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 CDRT4Q8N9R6 151 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 CDCA3Q99618 268 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-209ENST00000627620 ACTR6Q9GZN1 396 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 TMEM185BQ9H7F4 350 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 LMAN1LQ9HAT1 526 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 AGAP5A6NIR3 686 aa12.13□□□□□ -0.47
SCN8A-209ENST00000627620 DRGXA6NNA5 263 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms