RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 EIF2B1Q14232 305 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 HERC4Q5GLZ8 1057 aaPredicted RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 PRR5LQ6MZQ0 368 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 DPY19L2P2Q6ZN68 376 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 RANBP3LQ86VV4 465 aaPredicted RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 COLGALT1Q8NBJ5 622 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 FNDC8Q8TC99 324 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 ALG9Q9H6U8 611 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 KCNMB3Q9NPA1 279 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 HPS4Q9NQG7 708 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 APOBEC3BQ9UH17 382 aaKnown RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 MTF2Q9Y483 593 aaPredicted RBP2.29□□□□□ -2.04
VBP1-204ENST00000625964 FLVCR1Q9Y5Y0 555 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 HECW2Q9P2P5 1572 aa2.29□□□□□ -2.04
VBP1-204ENST00000625964 GAPVD1Q14C86 1478 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 SMARCA4P51532 1647 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 IGLV8-61A0A075B6I0 122 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 FAM170AA1A519 330 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 LRIT2A6NDA9 550 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 HSF2BPO75031 334 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 SDC3O75056 442 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 LRP3O75074 770 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 GOSR1O95249 250 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 HOXB7P09629 217 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 TMOD1P28289 359 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 POU3F4P49335 361 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 CCL11P51671 97 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 RPS8P62241 208 aaKnown RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 TSTA3Q13630 321 aaPredicted RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 BTG3Q14201 252 aaPredicted RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 ZKSCAN8Q15776 578 aaPredicted RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 GLYR1Q49A26 553 aaPredicted RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 CADM2Q8N3J6 435 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 CHCHD4Q8N4Q1 142 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 TMEM45BQ96B21 275 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 FAM122AQ96E09 287 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 DNAJA3Q96EY1 480 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 DTD2Q96FN9 168 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 TSPAN18Q96SJ8 248 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 OPN3Q9H1Y3 402 aaPredicted RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 COMMD8Q9NX08 183 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 TMEM9Q9P0T7 183 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 MIOXQ9UGB7 285 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 PURGQ9UJV8 347 aaKnown RBP2.28□□□□□ -2.04
VBP1-204ENST00000625964 NPC1L1Q9UHC9 1359 aa2.28□□□□□ -2.04
VBP1-204ENST00000625964 AQRO60306 1485 aaKnown RBP eCLIP2.28□□□□□ -2.05
VBP1-204ENST00000625964 MACROD2A1Z1Q3 448 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PDLIM1O00151 329 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 NME2P1O60361 137 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 STAM2O75886 525 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 IGSF6O95976 241 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 ACTL6AO96019 429 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CCDC166P0CW27 439 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 SGSHP51688 502 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 GFPT1Q06210 699 aaPredicted RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 PUDPQ08623 228 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 LGSNQ5TDP6 509 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 MEDAGQ5VYS4 303 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CEND1Q8N111 149 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CENPSQ8N2Z9 138 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 DLX4Q92988 240 aaPredicted RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 C11orf24Q96F05 449 aaPredicted RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 ZNF560Q96MR9 790 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 STARD5Q9NSY2 213 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 LHX3Q9UBR4 397 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 FAM153AQ9UHL3 310 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 BARX2Q9UMQ3 279 aaPredicted RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 FKBP7Q9Y680 259 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 TNRQ92752 1358 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 ADGRL1O94910 1474 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PEG3Q9GZU2 1588 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 TRIOBPQ9H2D6 2365 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 TRBV7-9A0A0J9YWB2 115 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 BUB1O43683 1085 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 NOL4O94818 638 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CXCL14O95715 111 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PGK1P00558 417 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PRB2P02812 416 aaPredicted RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 HSPB1P04792 205 aaKnown RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 H2AFZP0C0S5 128 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CPN1P15169 458 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 SDC1P18827 310 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PSMB1P20618 241 aaKnown RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 IGHV1-2P23083 117 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PTBP1P26599 531 aaKnown RBP eCLIP2.27□□□□□ -2.051e-7■■■■□ 23.7
VBP1-204ENST00000625964 RFC2P35250 354 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 OR3A4PP47883 348 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 NT5C2P49902 561 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CASP9P55211 416 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 RIPK4P57078 832 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 NME3Q13232 169 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 IL18R1Q13478 541 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 CARTPTQ16568 116 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 DCAF4L1Q3SXM0 396 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 DMKNQ6E0U4 476 aaPredicted RBP2.27□□□□□ -2.05
VBP1-204ENST00000625964 GPBP1Q86WP2 473 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 UNC45BQ8IWX7 931 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 PEX5LQ8IYB4 626 aa2.27□□□□□ -2.05
VBP1-204ENST00000625964 C14orf178Q8N769 122 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms