RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 INHBAP08476 426 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 LHX2P50458 406 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 GFRA1P56159 465 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 LETMD1Q6P1Q0 360 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 CLEC9AQ6UXN8 241 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 SMPDL3BQ92485 455 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 KAT2AQ92830 837 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 ZNF681Q96N22 645 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 UCN2Q96RP3 112 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 ZNF395Q9H8N7 513 aaPredicted RBP17.2■□□□□ 0.34
SMN1-211ENST00000625245 BRF2Q9HAW0 419 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 NINJ2Q9NZG7 142 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 CLCF1Q9UBD9 225 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 HEY2Q9UBP5 337 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 PACSIN3Q9UKS6 424 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 WIF1Q9Y5W5 379 aa17.2■□□□□ 0.34
SMN1-211ENST00000625245 SMNDC1O75940 238 aaKnown RBP eCLIP17.19■□□□□ 0.34
SMN1-211ENST00000625245 TGM6O95932 706 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 RPS17P08708 135 aaKnown RBP17.19■□□□□ 0.34
SMN1-211ENST00000625245 CHMP24386 653 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 IL12BP29460 328 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 KRT20P35900 424 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 CLDN18P56856 261 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 EEF1A1P68104 462 aaKnown RBP17.19■□□□□ 0.34
SMN1-211ENST00000625245 TSNAXIP1Q2TAA8 658 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 EEF1A1P5Q5VTE0 462 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 SHEQ5VZ18 495 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 CHMP1BQ7LBR1 199 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 KRTAP1-3Q8IUG1 177 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 ZNF483Q8TF39 744 aaPredicted RBP17.19■□□□□ 0.34
SMN1-211ENST00000625245 DTNBP1Q96EV8 351 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 LRRC1Q9BTT6 524 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 ZDHHC18Q9NUE0 388 aa17.19■□□□□ 0.34
SMN1-211ENST00000625245 C6orf203Q9P0P8 240 aaPredicted RBP17.19■□□□□ 0.34
SMN1-211ENST00000625245 A0A1W2PNV4 684 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 ARHGEF9O43307 516 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 ABCB7O75027 752 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 BCAS2O75934 225 aaPredicted RBP17.18■□□□□ 0.34
SMN1-211ENST00000625245 OR4F21O95013 312 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 ZNF708P17019 499 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 DPP4P27487 766 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 MAGEA12P43365 314 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 CORO7P57737 925 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 TRA2BP62995 288 aaKnown RBP17.18■□□□□ 0.34
SMN1-211ENST00000625245 FAM27E3Q08E93 113 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 EFR3AQ14156 821 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 ZNF628Q5EBL2 1059 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 TEX35Q5T0J7 233 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 LARP4Q71RC2 724 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMN1-211ENST00000625245 TAOK1Q7L7X3 1001 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 P3H2Q8IVL5 708 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 CNEP1R1Q8N9A8 125 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 OR4K17Q8NGC6 315 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 OR9A2Q8NGT5 310 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 EXOSC8Q96B26 276 aaKnown RBP17.18■□□□□ 0.34
SMN1-211ENST00000625245 SLC35A4Q96G79 324 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 FAM111AQ96PZ2 611 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 MRPL57Q9BQC6 102 aaKnown RBP17.18■□□□□ 0.34
SMN1-211ENST00000625245 VPS29Q9UBQ0 182 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 DLGAP4Q9Y2H0 992 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 TESMINQ9Y4I5 508 aa17.18■□□□□ 0.34
SMN1-211ENST00000625245 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 MSTNO14793 375 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 ZIC3O60481 467 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 TSPAN2O60636 221 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 TNFSF13O75888 250 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 CT45A8P0DMV1 189 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 CT45A9P0DMV2 189 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 COL6A2P12110 1019 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 GRK2P25098 689 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 CT45A2Q5DJT8 189 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 TCHHL1Q5QJ38 904 aaPredicted RBP17.17■□□□□ 0.34
SMN1-211ENST00000625245 C8orf74Q6P047 294 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 SYT10Q6XYQ8 523 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 CXorf67Q86X51 503 aaPredicted RBP17.17■□□□□ 0.34
SMN1-211ENST00000625245 UBQLNLQ8IYU4 475 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 CDYL2Q8N8U2 506 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 ZNF675Q8TD23 568 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
SMN1-211ENST00000625245 EFHD2Q96C19 240 aaPredicted RBP17.17■□□□□ 0.34
SMN1-211ENST00000625245 WFIKKN1Q96NZ8 548 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 BTBD9Q96Q07 612 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 MRPL46Q9H2W6 279 aaKnown RBP17.17■□□□□ 0.34
SMN1-211ENST00000625245 PCNX3Q9H6A9 2034 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 KLHL28Q9NXS3 571 aa17.17■□□□□ 0.34
SMN1-211ENST00000625245 A8MT66 165 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 POC1B-GALNT4F8VUJ3 575 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 MANBAO00462 879 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 SMPD2O60906 423 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 IL3P08700 152 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 SERPINB9P50453 376 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 VWA1Q6PCB0 445 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 NPSR1Q6W5P4 371 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 SLC44A2Q8IWA5 706 aaPredicted RBP17.16■□□□□ 0.34
SMN1-211ENST00000625245 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 PAFAH2Q99487 392 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 FOLH1BQ9HBA9 442 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 GIMAP4Q9NUV9 329 aa17.16■□□□□ 0.34
SMN1-211ENST00000625245 TRPS1Q9UHF7 1281 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms