RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 SLC7A13Q8TCU3 470 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 HOXB13Q92826 284 aaPredicted RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 PRRC1Q96M27 445 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 RASSF1Q9NS23 344 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 REV1Q9UBZ9 1251 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 FTSJ1Q9UET6 329 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 MKLN1Q9UL63 735 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 TMCC3Q9ULS5 477 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 TMEM184BQ9Y519 407 aaPredicted RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 COMMD3-BMI1R4GMX3 469 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 KNL1Q8NG31 2342 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 TNRC6BQ9UPQ9 1833 aaKnown RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CCDC163A0A0D9SF12 145 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 H3BMH7 237 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 UGT2B17O75795 530 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CBX7O95931 251 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 KRT20P35900 424 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 GSSP48637 474 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 SMIM11AP58511 58 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 MAP4K2Q12851 820 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 ERV3-1Q14264 604 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 NR1D2Q14995 579 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CCNJQ5T5M9 372 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 PGBD2Q6P3X8 592 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 ZCCHC12Q6PEW1 402 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 PODNL1Q6PEZ8 512 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 NLGN4XQ8N0W4 816 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CLIP4Q8N3C7 705 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CDRT4Q8N9R6 151 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 OR6C4Q8NGE1 309 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 MAFAQ8NHW3 353 aaPredicted RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 PIK3R3Q92569 461 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 STACQ99469 402 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 TUBA1CQ9BQE3 449 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 RHNO1Q9BSD3 238 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 FNDC11Q9BVV2 318 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 ZNF350Q9GZX5 532 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 DUSP21Q9H596 190 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 MTHFD2LQ9H903 347 aaPredicted RBP12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CXorf21Q9HAI6 301 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 FANCEQ9HB96 536 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 DUSP22Q9NRW4 184 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 TMEM9Q9P0T7 183 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 WDR45Q9Y484 360 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 NINQ8N4C6 2090 aa12.34□□□□□ -0.43
C3orf56-201ENST00000624688 CACNA1IQ9P0X4 2223 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 CENPVL1A0A0U1RR11 272 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 FRS3O43559 492 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 CTNSO60931 367 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ADAP00813 363 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ALOX5P09917 674 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 GLB1P16278 677 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 GABRB1P18505 474 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 PCMT1P22061 227 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 RPS4Y1P22090 263 aaKnown RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 SLC5A2P31639 672 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 CSF2RBP32927 897 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 SKP1P63208 163 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 SLC35A2P78381 396 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 BTG2P78543 158 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 HPCAP84074 193 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 PTGES3Q15185 160 aaKnown RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 TCTE1Q5JU00 501 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 DCST2Q5T1A1 773 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 LYSMD4Q5XG99 296 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 GTF2IRD2BQ6EKJ0 949 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 GTF2IRD2Q86UP8 949 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ZNF595Q8IYB9 648 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 VWA5B2Q8N398 1253 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 METTL27Q8N6F8 245 aaPredicted RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 MORN4Q8NDC4 146 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 OR13F1Q8NGS4 319 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 FAM81AQ8TBF8 368 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 MMABQ96EY8 250 aaPredicted RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 AHCYL2Q96HN2 611 aaKnown RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 NODALQ96S42 347 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ELF4Q99607 663 aaPredicted RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 SAP130Q9H0E3 1048 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 CTPS2Q9NRF8 586 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ENAMQ9NRM1 1142 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 FBXO34Q9NWN3 711 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ZNF226Q9NYT6 803 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 PTTG2Q9NZH5 202 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ERVK-18Q9QC07 812 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 SATB2Q9UPW6 733 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 MGAT4BQ9UQ53 548 aa12.33□□□□□ -0.44
C3orf56-201ENST00000624688 ZNF443Q9Y2A4 671 aaPredicted RBP12.33□□□□□ -0.44
C3orf56-201ENST00000624688 BLACEA4D250 179 aa12.32□□□□□ -0.44
C3orf56-201ENST00000624688 OR2W5A6NFC9 320 aa12.32□□□□□ -0.44
C3orf56-201ENST00000624688 CLDN24A6NM45 220 aa12.32□□□□□ -0.44
C3orf56-201ENST00000624688 ZAR1LA6NP61 321 aa12.32□□□□□ -0.44
C3orf56-201ENST00000624688 HYAL3O43820 417 aaPredicted RBP12.32□□□□□ -0.44
C3orf56-201ENST00000624688 OR10H2O60403 315 aa12.32□□□□□ -0.44
C3orf56-201ENST00000624688 OR10H3O60404 316 aa12.32□□□□□ -0.44
C3orf56-201ENST00000624688 CDC123O75794 336 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms