RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ACAD11Q709F0 780 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 ZFP28Q8NHY6 868 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 NEIL3Q8TAT5 605 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 HOXB13Q92826 284 aaPredicted RBP11.4□□□□□ -0.58
LINC00963-217ENST00000624009 KAT2AQ92830 837 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 ZBED6CLQ96FA7 236 aaPredicted RBP11.4□□□□□ -0.58
LINC00963-217ENST00000624009 COL21A1Q96P44 957 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 GLIPR2Q9H4G4 154 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 RUBCNLQ9H714 662 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 FOLH1BQ9HBA9 442 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 HHATLQ9HCP6 504 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 HAO1Q9UJM8 370 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 MAPRE3Q9UPY8 281 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 C15orf41Q9Y2V0 281 aa11.4□□□□□ -0.58
LINC00963-217ENST00000624009 ATP6AP2A0A1C7CYW4 349 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 UPK1AO00322 258 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 PIP5K1BO14986 540 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 PDPK1O15530 556 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ATP6AP2O75787 350 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 SOX30O94993 753 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 CLDN14O95500 239 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 JUNP05412 331 aaKnown RBP11.39□□□□□ -0.59
LINC00963-217ENST00000624009 RFPL3SP0C7P2 107 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 LINC00032P0C843 101 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 PRPS2P11908 318 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 BCKDHAP12694 445 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 TACR1P25103 407 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ACVR2AP27037 513 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ARRB2P32121 409 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 DCTP40126 519 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 C21orf58P58505 322 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 RPL38P63173 70 aaKnown RBP11.39□□□□□ -0.59
LINC00963-217ENST00000624009 SF3B4Q15427 424 aaKnown RBP eCLIP11.39□□□□□ -0.598e-7■■■■□ 23.2
LINC00963-217ENST00000624009 ATP6AP1LQ52LC2 224 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 FNDC7Q5VTL7 733 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 TIGD3Q6B0B8 471 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 FAM180BQ6P0A1 224 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ZCCHC23Q6ZST2 131 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 DDIASQ8IXT1 998 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 SIMC1Q8NDZ2 872 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 OR5M3Q8NGP4 307 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ASB5Q8WWX0 329 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 PPCDCQ96CD2 204 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ELP4Q96EB1 424 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 EGLN2Q96KS0 407 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 LMF2Q9BU23 707 aaKnown RBP11.39□□□□□ -0.59
LINC00963-217ENST00000624009 LDAHQ9H6V9 325 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 METTL7AQ9H8H3 244 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 DDX18Q9NVP1 670 aaKnown RBP11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ASIC5Q9NY37 505 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 COQ3Q9NZJ6 369 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 ATP6V1HQ9UI12 483 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 SH3BGRL2Q9UJC5 107 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 MRTO4Q9UKD2 239 aaKnown RBP11.39□□□□□ -0.59
LINC00963-217ENST00000624009 MRPS18CQ9Y3D5 142 aaKnown RBP11.39□□□□□ -0.59
LINC00963-217ENST00000624009 PTGDR2Q9Y5Y4 395 aa11.39□□□□□ -0.59
LINC00963-217ENST00000624009 AKAP6Q13023 2319 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 TMEM233B4DJY2 109 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 NPIPA2E9PIF3 369 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 NPIPA3F8WFD2 350 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 SNPHO15079 494 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 HNRNPRO43390 633 aaKnown RBP11.38□□□□□ -0.59
LINC00963-217ENST00000624009 TSPAN2O60636 221 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 UGT2B11O75310 529 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 CBR3O75828 277 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PDE9AO76083 593 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 KRT20P35900 424 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 MC3RP41968 323 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 MASP1P48740 699 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 CDK9P50750 372 aaKnown RBP11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PSMD4P55036 377 aaKnown RBP11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PSG6Q00889 435 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 ZNHIT3Q15649 155 aaPredicted RBP11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PRSS53Q2L4Q9 553 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 VPS26BQ4G0F5 336 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 C6orf136Q5SQH8 315 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 WLSQ5T9L3 541 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 ZCCHC12Q6PEW1 402 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 OR1J4Q8NGS1 313 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 CEP70Q8NHQ1 597 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 CDC26Q8NHZ8 85 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PSMA8Q8TAA3 256 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PPP1R14CQ8TAE6 165 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 RND1Q92730 232 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 TMBIM1Q969X1 311 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 OSBPL11Q9BXB4 747 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 C3orf14Q9HBI5 128 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 ATAD3AQ9NVI7 634 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 ZDHHC2Q9UIJ5 367 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 ACAD8Q9UKU7 415 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 ABCG2Q9UNQ0 655 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 FIS1Q9Y3D6 152 aa11.38□□□□□ -0.59
LINC00963-217ENST00000624009 PRAMEF25A6NGN4 478 aa11.37□□□□□ -0.59
LINC00963-217ENST00000624009 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
LINC00963-217ENST00000624009 PRSS44E7EML9 344 aa11.37□□□□□ -0.59
LINC00963-217ENST00000624009 SCAMP2O15127 329 aaKnown RBP11.37□□□□□ -0.59
LINC00963-217ENST00000624009 ICOSLGO75144 302 aa11.37□□□□□ -0.59
LINC00963-217ENST00000624009 REM1O75628 298 aa11.37□□□□□ -0.59
LINC00963-217ENST00000624009 HSPA4LO95757 839 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms