RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PGDP52209 483 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PDX1P52945 283 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 NKX2-5P52952 324 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 TUBA4AP68366 448 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 FUT5Q11128 374 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 C14orf28Q4W4Y0 310 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 COLEC12Q5KU26 742 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 DCST1Q5T197 706 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 Q6ZNX1 250 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 MEX3DQ86XN8 651 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PIK3R3Q92569 461 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SLC35A4Q96G79 324 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 LYRM4Q9HD34 91 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PDE7BQ9NP56 450 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 AMBNQ9NP70 447 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 RNF215Q9Y6U7 377 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 NPIPA5A0A0B4J1W7 369 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 NPIPA7E9PJI5 369 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 J3QRK9 145 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SLC1A7O00341 560 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PIAS2O75928 621 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 BMP10O95393 424 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 GPR75O95800 540 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 IFNA16P05015 189 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 NPIPA8P0DM63 369 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 ANXA8P13928 327 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 FASLGP48023 281 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 HLCSP50747 726 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 CDK5R2Q13319 367 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 PMS2P3Q13401 168 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 NDUFA9Q16795 377 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 RBM48Q5RL73 367 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 GPR107Q5VW38 600 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 TMEM236Q5W0B7 351 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 MFSD12Q6NUT3 480 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 FIGNL1Q6PIW4 674 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 IQCHQ86VS3 1027 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 COMTD1Q86VU5 262 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 GATAD2AQ86YP4 633 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 COX18Q8N8Q8 333 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 ZNF540Q8NDQ6 660 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 HDAC2Q92769 488 aaKnown RBP9.3□□□□□ -0.92
VTA1-205ENST00000620996 HPS1Q92902 700 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 POU2F3Q9UKI9 436 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 HCN4Q9Y3Q4 1203 aa9.3□□□□□ -0.92
VTA1-205ENST00000620996 SH3PXD2BA1X283 911 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CPSF4LA6NMK7 179 aaKnown RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 C10orf142B7Z368 130 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CASC3O15234 703 aaKnown RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 SLC16A6O15403 523 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 NOL3O60936 208 aaKnown RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 CRHBPP24387 322 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 TAS2R41P59536 307 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 ISL1P61371 349 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 FAHD1Q6P587 224 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 OR6T1Q8NGN1 323 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CAPSLQ8WWF8 208 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 TCTN2Q96GX1 697 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 NEURL2Q9BR09 285 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CNPPD1Q9BV87 410 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 NPLQ9BXD5 320 aaPredicted RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 SPRTNQ9H040 489 aaPredicted RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 TRIM45Q9H8W5 580 aaPredicted RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 C11orf16Q9NQ32 467 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 POFUT2Q9Y2G5 429 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 WDR45Q9Y484 360 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 A0A0G2JPF8 293 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 HYKKA2RU49 373 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 A8MVJ9 347 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 HNRNPCL2B2RXH8 293 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 HNRNPCL3B7ZW38 293 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 FFAR1O14842 300 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 GASTP01350 101 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 HNRNPCL4P0DMR1 293 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 RAB38P57729 211 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 NNATQ16517 81 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 DUSP5Q16690 384 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 TCTN3Q6NUS6 607 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 ZNF773Q6PK81 442 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 PRSS58Q8IYP2 241 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 PARP8Q8N3A8 854 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 OR52P1PQ8NH57 321 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 ZDHHC12Q96GR4 267 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 KLHL28Q9NXS3 571 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 RSL24D1Q9UHA3 163 aaKnown RBP9.29□□□□□ -0.92
VTA1-205ENST00000620996 ANKRD34BA5PLL1 514 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 DUXAA6NLW8 204 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CLDN24A6NM45 220 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 TMX2-CTNND1H3BSU7 103 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 K7ESF4 209 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 RECKO95980 971 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 ALOX5P09917 674 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 TNNI3P19429 210 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 CTSKP43235 329 aa9.29□□□□□ -0.92
VTA1-205ENST00000620996 NUDT6P53370 316 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms