RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 FAM129CQ86XR2 697 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 LAS2Q8IYD9 372 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF655Q8N720 491 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 MRPL43Q8N983 215 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 GDPD1Q8N9F7 314 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR4M2Q8NGB6 313 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR52I1Q8NGK6 324 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR5D16Q8NGK9 328 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 POP5Q969H6 163 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SLC6A16Q9GZN6 736 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 QRSL1Q9H0R6 528 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 MTG2Q9H4K7 406 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SUV39H2Q9H5I1 410 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 NUDT15Q9NV35 164 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 MARCH5Q9NX47 278 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 COMMD9Q9P000 198 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SH2B3Q9UQQ2 575 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 TSPAN6O43657 245 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 LANCL1O43813 399 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HIST1H2ABP04908 130 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 C8GP07360 202 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 IL3P08700 152 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF10P21506 573 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 NT5EP21589 574 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OPRD1P41143 372 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SLC6A12P48065 614 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 STARP49675 285 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 DSTNP60981 165 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 RRAS2P62070 204 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 NTHL1P78549 312 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 MPEG1Q2M385 716 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 LIN54Q6MZP7 749 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HIST3H2AQ7L7L0 130 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 FAM220AQ7Z4H9 259 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 NEIL3Q8TAT5 605 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 CYB5D2Q8WUJ1 264 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SLC38A5Q8WUX1 472 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SNX33Q8WV41 574 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HIST1H2ACQ93077 130 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PPP1R14AQ96A00 147 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SIPA1Q96FS4 1042 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 GDF15Q99988 308 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ABCG5Q9H222 651 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 DOCK6Q96HP0 2047 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 GLOD5A6NK44 160 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 CDK2AP1O14519 115 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 AKAP8O43823 692 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 MPZL2O60487 215 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 LALBAP00709 142 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HRGP04196 525 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PCCBP05166 539 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 H1F0P07305 194 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR12D1P0DN82 309 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PEPDP12955 493 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 TIA1P31483 386 aaKnown RBP eCLIP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ETV3P41162 512 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HNMTP50135 292 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF81P51508 661 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SEC13P55735 322 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 GPR33Q49SQ1 333 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 FAM27D1Q5T7N8 215 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OLFML2AQ68BL7 652 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ARL9Q6T311 187 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 GLRX5Q86SX6 157 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HORMAD2Q8N7B1 307 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PROKR2Q8NFJ6 384 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR52N2Q8NGI0 321 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR8J1Q8NGP2 316 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OR14C36Q8NHC7 312 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 WDR20Q8TBZ3 569 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 UBTD2Q8WUN7 234 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 TMEM19Q96HH6 336 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 DHRS9Q9BPW9 319 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 RIOK2Q9BVS4 552 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 TTTY10Q9BZA0 68 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 CHST8Q9H2A9 424 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 TTYH1Q9H313 450 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 REEP4Q9H6H4 257 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SPHK2Q9NRA0 654 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 NDUFB11Q9NX14 153 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SOHLH2Q9NX45 425 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 GLTPQ9NZD2 209 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 EXTL2Q9UBQ6 330 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 HCN2Q9UL51 889 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PLAGL1Q9UM63 463 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 MRPS17Q9Y2R5 130 aaKnown RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SHISA3A0PJX4 238 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 FAM183AA6NL82 134 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CACNB4O00305 520 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SLC31A1O15431 190 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 EEF1E1O43324 174 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 OR7A10O76100 309 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 LATS1O95835 1130 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 C1QBP02746 253 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PDGFAP04085 211 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ALPPP05187 535 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 DRD5P21918 477 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms