RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RPP38P78345 283 aaKnown RBP16.8■□□□□ 0.28
LITAF-220ENST00000620789 PHC1P78364 1004 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 RNFT1Q5M7Z0 435 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 ANXA8L1Q5VT79 327 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 PRAMEF20Q5VT98 475 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 NUP54Q7Z3B4 507 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 WDR53Q7Z5U6 358 aaPredicted RBP16.8■□□□□ 0.28
LITAF-220ENST00000620789 CLECL1Q8IZS7 167 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 GLB1L3Q8NCI6 653 aaPredicted RBP16.8■□□□□ 0.28
LITAF-220ENST00000620789 VPS37AQ8NEZ2 397 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 SPPL2AQ8TCT8 520 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 DIO2Q92813 273 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 HOXB13Q92826 284 aaPredicted RBP16.8■□□□□ 0.28
LITAF-220ENST00000620789 HGDQ93099 445 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 ZBTB18Q99592 522 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 Q9N2J8 555 aa16.8■□□□□ 0.28
LITAF-220ENST00000620789 SDR39U1Q9NRG7 319 aaPredicted RBP16.8■□□□□ 0.28
LITAF-220ENST00000620789 RP1L1Q8IWN7 2480 aaPredicted RBP16.79■□□□□ 0.28
LITAF-220ENST00000620789 PRSS51A0A1B0GVH4 220 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 ANKRD33BA6NCL7 494 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 OR6C70A6NIJ9 312 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 ABCB7O75027 752 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 REM1O75628 298 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 SLC22A3O75751 556 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 GNLYP22749 145 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 S100A3P33764 101 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 KRT20P35900 424 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 MAP3K8P41279 467 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 UQCRFS1P47985 274 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 CCT3P49368 545 aaKnown RBP16.79■□□□□ 0.28
LITAF-220ENST00000620789 KCNJ2P63252 427 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 GUCY1A3Q02108 690 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 MRPL49Q13405 166 aaKnown RBP16.79■□□□□ 0.28
LITAF-220ENST00000620789 SPDYE7PQ495Y7 208 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 VPS26BQ4G0F5 336 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 CYP27C1Q4G0S4 372 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 TBCELQ5QJ74 424 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 MFSD12Q6NUT3 480 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 SIAH3Q8IW03 269 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 CDRT4Q8N9R6 151 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 OR4N2Q8NGD1 307 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 OR56A1Q8NGH5 318 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 SFXN5Q8TD22 340 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 STON2Q8WXE9 905 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 MOAP1Q96BY2 351 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 SLC35A4Q96G79 324 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 COL21A1Q96P44 957 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 SIKE1Q9BRV8 207 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 PROK2Q9HC23 129 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 FAM120CQ9NX05 1096 aaKnown RBP16.79■□□□□ 0.28
LITAF-220ENST00000620789 ZIM2Q9NZV7 527 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 PCDHGB4Q9UN71 923 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 RELNP78509 3460 aa16.79■□□□□ 0.28
LITAF-220ENST00000620789 ANKUB1A6NFN9 424 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 C9JVG2 144 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 DYNC1I1O14576 645 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 TFECO14948 347 aaPredicted RBP16.78■□□□□ 0.28
LITAF-220ENST00000620789 TSPAN2O60636 221 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 UGT2B11O75310 529 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 NKX2-2O95096 273 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 HMGN2P05204 90 aaKnown RBP16.78■□□□□ 0.28
LITAF-220ENST00000620789 PGRP06401 933 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 IL12BP29460 328 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 SOAT1P35610 550 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 CASP3P42574 277 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 DGKQP52824 942 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 PNLIPRP2P54317 469 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 PLGLB1Q02325 96 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 FOXO1Q12778 655 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 GAB1Q13480 694 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 TP53BP2Q13625 1128 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 DESI1Q6ICB0 168 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 TMEM81Q6P7N7 255 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 ZCCHC12Q6PEW1 402 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 ANKRD46Q86W74 232 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 MIER2Q8N344 545 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 OR4A15Q8NGL6 344 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 SLC9A6Q92581 669 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 THOC1Q96FV9 657 aaKnown RBP16.78■□□□□ 0.28
LITAF-220ENST00000620789 ADOQ96SZ5 270 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 DOHHQ9BU89 302 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 ANGPTL4Q9BY76 406 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 TTTY12Q9BZ98 90 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 TSPAN10Q9H1Z9 355 aaPredicted RBP16.78■□□□□ 0.28
LITAF-220ENST00000620789 CCDC134Q9H6E4 229 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 NPHS2Q9NP85 383 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 TUBA8Q9NY65 449 aaPredicted RBP16.78■□□□□ 0.28
LITAF-220ENST00000620789 CBLCQ9ULV8 474 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.78■□□□□ 0.28
LITAF-220ENST00000620789 EML6Q6ZMW3 1958 aa16.78■□□□□ 0.28
LITAF-220ENST00000620789 NPIPA5E9PKD4 350 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 ACOT7O00154 380 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 WISP2O76076 250 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 GLSO94925 669 aaPredicted RBP16.77■□□□□ 0.28
LITAF-220ENST00000620789 ACP2P11117 423 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 GABRA3P34903 492 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 MRPL19P49406 292 aaKnown RBP16.77■□□□□ 0.28
LITAF-220ENST00000620789 PRIM2P49643 509 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 EFR3AQ14156 821 aa16.77■□□□□ 0.28
LITAF-220ENST00000620789 ELOAQ14241 798 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms