RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GSTM5P46439 218 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 CHN2P52757 468 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 CDKN2DP55273 166 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 MGAT2Q10469 447 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 GPS1Q13098 491 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 DHX34Q14147 1143 aaKnown RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 HLA-DQA1Q5Y7H0 255 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 GTF2IRD2BQ6EKJ0 949 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 HIST2H2AA3Q6FI13 130 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 PAQR3Q6TCH7 311 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 CHMP1BQ7LBR1 199 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 GTF2IRD2Q86UP8 949 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 ZNF540Q8NDQ6 660 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 OR2M3Q8NG83 312 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 OMA1Q96E52 524 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 JSRP1Q96MG2 331 aaPredicted RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 SFXN2Q96NB2 322 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 TMEM79Q9BSE2 394 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 MCMBPQ9BTE3 642 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 ZNF717Q9BY31 904 aaPredicted RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 FBXO6Q9NRD1 293 aaPredicted RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 SDHAF3Q9NRP4 125 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 DNAJC11Q9NVH1 559 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 WBP11Q9Y2W2 641 aaKnown RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 ACANP16112 2415 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 ADAMDEC1O15204 470 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 LDB3O75112 727 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 SMNDC1O75940 238 aaKnown RBP eCLIP4.08□□□□□ -1.76
SNCA-213ENST00000618500 PDE5AO76074 875 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 SERPIND1P05546 499 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 PABPC4LP0CB38 370 aaKnown RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 CD22P20273 847 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 ELK4P28324 431 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 AGTR1P30556 359 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 PPOXP50336 477 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 AGFG1P52594 562 aaKnown RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 CDH11P55287 796 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 SESN2P58004 480 aaPredicted RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 HILS1P60008 231 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 TRA2BP62995 288 aaKnown RBP4.08□□□□□ -1.76
SNCA-213ENST00000618500 PHEXP78562 749 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 PDK3Q15120 406 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 AP5B1Q2VPB7 878 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 TIMM23BQ5SRD1 257 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 SFRP5Q5T4F7 317 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 DEPDC1Q5TB30 811 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 SEL1L2Q5TEA6 688 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 C6orf163Q5TEZ5 329 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 SULT1C3Q6IMI6 304 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 TFAP2EQ6VUC0 442 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 Q6ZSR9 355 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 GCNT2Q8N0V5 402 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 FIG4Q92562 907 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 GBP4Q96PP9 640 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 DERL2Q9GZP9 239 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 IFNKQ9P0W0 207 aa4.08□□□□□ -1.76
SNCA-213ENST00000618500 DYSFO75923 2080 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 CSPG4Q6UVK1 2322 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 COL6A5A8TX70 2615 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 LOC390937A0A1W2PQ73 354 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 HRKO00198 91 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 UBFD1O14562 309 aaKnown RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 GPRIN2O60269 458 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 ZNF37AP17032 561 aaPredicted RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 CDH15P55291 814 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 KIF5AQ12840 1032 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 SPA17Q15506 151 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 PRICKLE4Q2TBC4 344 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 STEAP4Q687X5 459 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 TRABD2AQ86V40 505 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 DENND6AQ8IWF6 608 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 RNF128Q8TEB7 428 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 HOXB13Q92826 284 aaPredicted RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 ZBTB8AQ96BR9 441 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 C1GALT1C1Q96EU7 318 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 TSNARE1Q96NA8 513 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 FAM118BQ9BPY3 351 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 SLITRK2Q9H156 845 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 MOV10Q9HCE1 1003 aaKnown RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 FAM120CQ9NX05 1096 aaKnown RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 XPR1Q9UBH6 696 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 SLC22A14Q9Y267 594 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 GPR55Q9Y2T6 319 aaPredicted RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 MACROD2A1Z1Q3 448 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 EFCAB8A8MWE9 144 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 H0YIV9 168 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 GNB5O14775 395 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 HAUS5O94927 633 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 BMP4P12644 408 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 EPORP19235 508 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 GRK2P25098 689 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 TTKP33981 857 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 BSGP35613 385 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 CHRNB3Q05901 458 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 SLAMF1Q13291 335 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 PDK4Q16654 411 aa4.07□□□□□ -1.76
SNCA-213ENST00000618500 CTU2Q2VPK5 515 aaKnown RBP4.07□□□□□ -1.76
SNCA-213ENST00000618500 PDSS1Q5T2R2 415 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms