RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ZAR1LA6NP61 321 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 M0R082 166 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 GABARAPO95166 117 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ZIC2O95409 532 aaPredicted RBP11.63□□□□□ -0.55
CIITA-212ENST00000618207 OSMP13725 252 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ALOX12P18054 663 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 GABRB1P18505 474 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 GADD45AP24522 165 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 GSTM5P46439 218 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 MAZP56270 477 aaKnown RBP11.63□□□□□ -0.55
CIITA-212ENST00000618207 RPS3AP61247 264 aaKnown RBP11.63□□□□□ -0.55
CIITA-212ENST00000618207 ATP1A4Q13733 1029 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 DHRS4L2Q6PKH6 230 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 CASP12Q6UXS9 341 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ADCK1Q86TW2 530 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 PIK3R3Q92569 461 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 LGALS12Q96DT0 336 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 YIPF6Q96EC8 236 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 SARGQ9BW04 601 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 ITPAQ9BY32 194 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 MIR1-1HGQ9H1L0 117 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 RERGLQ9H628 205 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 EGLN3Q9H6Z9 239 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 KCMF1Q9P0J7 381 aa11.63□□□□□ -0.55
CIITA-212ENST00000618207 EFCAB9A8MZ26 197 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 PRAMEF26H0Y7S4 382 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 AGRPO00253 132 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 FGF17O60258 216 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 LGI1O95970 557 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 CH25HO95992 272 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ADAP00813 363 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ALPPP05187 535 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 GRK5P34947 590 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 TRHRP34981 398 aaPredicted RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 CD97P48960 835 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ITGADQ13349 1161 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 METTL27Q8N6F8 245 aaPredicted RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 TMCO5AQ8N6Q1 288 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ZNF614Q8N883 585 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 WDR36Q8NI36 951 aaKnown RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 BBS10Q8TAM1 723 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ASB12Q8WXK4 309 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 CHCHD6Q9BRQ6 235 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 POLMQ9NP87 494 aaPredicted RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 MAN2C1Q9NTJ4 1040 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 FBXO34Q9NWN3 711 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 CLN6Q9NWW5 311 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 LYARQ9NX58 379 aaKnown RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 GPR52Q9Y2T5 361 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 PNMA8CA0A1B0GUJ8 204 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 C2orf74A8MZ97 194 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 FAAHO00519 579 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 TNFRSF10CO14798 259 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 AIREO43918 545 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ADORA3P0DMS8 318 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 DBTP11182 482 aaKnown RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 ST6GAL1P15907 406 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 TLX1P31314 330 aaPredicted RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 RABIFP47224 123 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ANXA11P50995 505 aaKnown RBP11.62□□□□□ -0.55
CIITA-212ENST00000618207 YPEL5P62699 121 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 FZD2Q14332 565 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 INAQ16352 499 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 DUSP5Q16690 384 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 FIGNL1Q6PIW4 674 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 TMEM64Q6YI46 380 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 RRM2BQ7LG56 351 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 AVL9Q8NBF6 648 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 CAMKVQ8NCB2 501 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ZHX1-C8orf76Q96EF9 292 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 GSDMCQ9BYG8 508 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 OR51E2Q9H255 320 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 DSN1Q9H410 356 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 ZSCAN32Q9NX65 697 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 KLHL3Q9UH77 587 aa11.62□□□□□ -0.55
CIITA-212ENST00000618207 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 TRIM64BA6NI03 449 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 E9PQ18 207 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 RDH16O75452 317 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 HOXC4P09017 264 aaPredicted RBP11.61□□□□□ -0.55
CIITA-212ENST00000618207 TGFBR2P37173 567 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
CIITA-212ENST00000618207 CAMK2BQ13554 666 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 DOC2BQ14184 412 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ERV3-1Q14264 604 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 NR1D2Q14995 579 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ARMCX4Q5H9R4 360 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 OR9A4Q8NGU2 314 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 OR52P1PQ8NH57 321 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 GIMAP5Q96F15 307 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ZNF764Q96H86 408 aaPredicted RBP11.61□□□□□ -0.55
CIITA-212ENST00000618207 FAM46AQ96IP4 442 aaKnown RBP11.61□□□□□ -0.55
CIITA-212ENST00000618207 PLEKHA8Q96JA3 519 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 SIGLEC11Q96RL6 698 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 SPATA5L1Q9BVQ7 753 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 ACTRT3Q9BYD9 372 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 PLA2G12AQ9BZM1 189 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 SEMA4GQ9NTN9 838 aa11.61□□□□□ -0.55
CIITA-212ENST00000618207 CLEC2DQ9UHP7 191 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms