RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 SLC3A1Q07837 685 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 E2F2Q14209 437 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 SLC30A6Q6NXT4 461 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 ZFYVE21Q9BQ24 234 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 TAS2R16Q9NYV7 291 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 IL20RAQ9UHF4 553 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 HCN1O60741 890 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 KLHL18O94889 574 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 DBIP07108 87 aaKnown RBP13.23□□□□□ -0.29
SSBP2-220ENST00000615665 PSKH1P11801 424 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 ELAVL4P26378 380 aaKnown RBP13.23□□□□□ -0.29
SSBP2-220ENST00000615665 LBX1P52954 281 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 WNT4P56705 351 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 WDR53Q7Z5U6 358 aaPredicted RBP13.23□□□□□ -0.29
SSBP2-220ENST00000615665 LRRC17Q8N6Y2 441 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 OR2L3Q8NG85 312 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 NEIL3Q8TAT5 605 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 OBP2AQ9NY56 170 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 CCDC59Q9P031 241 aaKnown RBP13.23□□□□□ -0.29
SSBP2-220ENST00000615665 SESN1Q9Y6P5 492 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 PIAS3Q9Y6X2 628 aa13.23□□□□□ -0.29
SSBP2-220ENST00000615665 ZFC3H1O60293 1989 aaKnown RBP13.22□□□□□ -0.29
SSBP2-220ENST00000615665 ELOA3DA6NLF2 546 aaPredicted RBP13.22□□□□□ -0.29
SSBP2-220ENST00000615665 OR5K4A6NMS3 321 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 GIPRP48546 466 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 HOXC5Q00444 222 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 CTBSQ01459 385 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 KIR2DS3Q14952 304 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 ELOA3BQ3SY89 546 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 ZNF542PQ5EBM4 170 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 FRRS1Q6ZNA5 592 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 ELOA3Q8NG57 546 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 OR8H1Q8NGG4 311 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 OR51A7Q8NH64 312 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 SP140LQ9H930 580 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 CPNE5Q9HCH3 593 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 SH2B3Q9UQQ2 575 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 CHURC1-FNTBB4DL54 471 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 PRODHO43272 600 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 SLC6A6P31641 620 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 GBX2P52951 348 aaPredicted RBP13.22□□□□□ -0.29
SSBP2-220ENST00000615665 ILKQ13418 452 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 C1orf61Q13536 156 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 SAXO2Q658L1 398 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 PCDHGB7Q9Y5F8 929 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 NYNRINQ9P2P1 1898 aaKnown RBP13.22□□□□□ -0.29
SSBP2-220ENST00000615665 TMEM150CB9EJG8 249 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 PTTG1O95997 202 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 MT-ND5P03915 603 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
SSBP2-220ENST00000615665 ZNF267Q14586 743 aaPredicted RBP13.22□□□□□ -0.29
SSBP2-220ENST00000615665 XAF1Q6GPH4 301 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 VRK2Q86Y07 508 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 C16orf58Q96GQ5 468 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 CCDC32Q9BV29 185 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 LGR4Q9BXB1 951 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 SAP130Q9H0E3 1048 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
SSBP2-220ENST00000615665 TRAPPC13A5PLN9 417 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 TRIM64CA6NLI5 447 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 FAM47E-STBD1D6RA91 191 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 AK1P00568 194 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 SERPINA3P01011 423 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 HK1P19367 917 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 BCL6P41182 706 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 MAGEA8P43361 318 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 UBE2UQ5VVX9 321 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 DHRS4L2Q6PKH6 230 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 MFSD9Q8NBP5 474 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 TBC1D20Q96BZ9 403 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 KLHDC7BQ96G42 594 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
SSBP2-220ENST00000615665 PLD2O14939 933 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 SSNA1O43805 119 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 ORC5O43913 435 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 TMPRSS11DO60235 418 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 UBXN7O94888 489 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 SLC9A3P48764 834 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 PSMD4P55036 377 aaKnown RBP13.21□□□□□ -0.29
SSBP2-220ENST00000615665 HTRA4P83105 476 aaPredicted RBP13.21□□□□□ -0.29
SSBP2-220ENST00000615665 CHRNEQ04844 493 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 NDUFAF6Q330K2 333 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 CDS1Q92903 461 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 PITX2Q99697 317 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 RHNO1Q9BSD3 238 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.29
SSBP2-220ENST00000615665 ACTR10Q9NZ32 417 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 MRPL3P09001 348 aaKnown RBP13.21□□□□□ -0.29
SSBP2-220ENST00000615665 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 F8A1P23610 371 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 PKLRP30613 574 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 LRIT3Q3SXY7 679 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 C18orf63Q68DL7 685 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 RPL13AP3Q6NVV1 102 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 PRSS58Q8IYP2 241 aa13.21□□□□□ -0.29
SSBP2-220ENST00000615665 QRSL1Q9H0R6 528 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms