RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 EHD3Q9NZN3 535 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 HYAL3O43820 417 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 CLEC2LP0C7M8 214 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 CD97P48960 835 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 PCYT1AP49585 367 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SNRPGP62308 76 aaKnown RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 TRA2BP62995 288 aaKnown RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 RUNX2Q13950 521 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SPHARQ15513 63 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 TRMT12Q53H54 448 aaKnown RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZMAT1Q5H9K5 638 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 MFSD4BQ5TF39 518 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLC30A6Q6NXT4 461 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 PAQR7Q86WK9 346 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 AMER2Q8N7J2 671 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 POC5Q8NA72 575 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 TTLQ8NG68 377 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 OR52I1Q8NGK6 324 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZFPM2Q8WW38 1151 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SIPA1Q96FS4 1042 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SNTG1Q9NSN8 517 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 CNOT2Q9NZN8 540 aaKnown RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 FAM170BA6NMN3 283 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 PLD2O14939 933 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 HCRTR1O43613 425 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 UPK1BO75841 260 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 SLC2A10O95528 541 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 SOX18P35713 384 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TUBA1BP68363 451 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ATAT1Q5SQI0 421 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TUBA1AQ71U36 451 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 C16orf62Q7Z3J2 963 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TMEM52Q8NDY8 209 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 OR8J1Q8NGP2 316 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 BBS10Q8TAM1 723 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 CRELD1Q96HD1 420 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 C10orf90Q96M02 699 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 PRRC1Q96M27 445 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZNF582Q96NG8 517 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GIMAP4Q9NUV9 329 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 LINC00854A0A1B0GVQ3 168 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GPR89AB7ZAQ6 455 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 EMC8O43402 210 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 OXSR1O95747 527 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GPR89BP0CG08 455 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 NR2F6P10588 404 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 PORP16435 677 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 AZGP1P25311 298 aaKnown RBP13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 CSTF2P33240 577 aaKnown RBP eCLIP13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 MPIP34949 423 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 AHRP35869 848 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 LSSP48449 732 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 FBXO43Q4G163 708 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TMEM92Q6UXU6 159 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 NATD1Q8N6N6 113 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 KBTBD8Q8NFY9 601 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TMEM255BQ8WV15 326 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 HPS1Q92902 700 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ELSPBP1Q96BH3 223 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ASPNQ9BXN1 380 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 PITHD1Q9GZP4 211 aaPredicted RBP13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TOR4AQ9NXH8 423 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 CLEC1BQ9P126 229 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZNF780BQ9Y6R6 833 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 OR6C74A6NCV1 312 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 A8MU76 341 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 RGS5O15539 181 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 MPZL2O60487 215 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ALPPP05187 535 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 PRG2P13727 222 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GNSP15586 552 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GSTM5P46439 218 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 TGM3Q08188 693 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 NUDT18Q6ZVK8 323 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ZNF438Q7Z4V0 828 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 BBS1Q8NFJ9 593 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 RASSF5Q8WWW0 418 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GATAD2BQ8WXI9 593 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 NUAK2Q9H093 628 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 GIN1Q9NXP7 522 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 ENOPH1Q9UHY7 261 aa13.19□□□□□ -0.3
PCDHGA3-202ENST00000612467 KCNK2O95069 426 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 DLGAP3O95886 979 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 CPN2P22792 545 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 CTHP32929 405 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 RFX3P48380 749 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 CAV3P56539 151 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 PRR5P85299 388 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 TEKQ02763 1124 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 GPR18Q14330 331 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 GPR68Q15743 365 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 ENTPD8Q5MY95 495 aa13.18□□□□□ -0.3
PCDHGA3-202ENST00000612467 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms