RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SERPINA7P05543 415 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 FESP07332 822 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 ITGA3P26006 1051 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 CDKN2CP42773 168 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 KIR3DL1P43629 444 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 MAPK12P53778 367 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 RAE1P78406 368 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 CHRNB3Q05901 458 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 STX4Q12846 297 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 MYBPC3Q14896 1274 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 EXT1Q16394 746 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 PGS1Q32NB8 556 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 GALNT18Q6P9A2 607 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 PAPD4Q6PIY7 484 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 CAMKMTQ7Z624 323 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 SATL1Q86VE3 508 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 C1orf52Q8N6N3 182 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 FDCSPQ8NFU4 85 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 C9orf43Q8TAL5 461 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 FIG4Q92562 907 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 TSC22D3Q99576 134 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 PRPF18Q99633 342 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 WDR77Q9BQA1 342 aaPredicted RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 MESP1Q9BRJ9 268 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 LHPPQ9H008 270 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 SLC25A18Q9H1K4 315 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 MAGIXQ9H6Y5 334 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 DCAF13Q9NV06 445 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 FAM120CQ9NX05 1096 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 GPR83Q9NYM4 423 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 MAPRE3Q9UPY8 281 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 ATG4BQ9Y4P1 393 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 CLDN16Q9Y5I7 305 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 GMEB1Q9Y692 573 aa8.23□□□□□ -1.09
SMAD4-217ENST00000611848 TNRC6AQ8NDV7 1962 aaKnown RBP8.23□□□□□ -1.09
SMAD4-217ENST00000611848 IGHV3-20A0A0C4DH32 117 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 A0A1W2PR48 441 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 A6NL46 340 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 TRIM64CA6NLI5 447 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 MASP2O00187 686 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 RFXANKO14593 260 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 AHCYL1O43865 530 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 MYO1DO94832 1006 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 SEC24DO94855 1032 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 PGM3O95394 542 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 AIFM1O95831 613 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 MT-ND1P03886 318 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 NR2F6P10588 404 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 TIA1P31483 386 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 GSTM5P46439 218 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 ASMTP46597 345 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 NR1H2P55055 460 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 Q0VFX4 171 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 LY6DQ14210 128 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 CNPY1Q3B7I2 92 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 CYBRD1Q53TN4 286 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 C18orf63Q68DL7 685 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 PLAG1Q6DJT9 500 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 OR4F3Q6IEY1 312 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 KRT80Q6KB66 452 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 JMJD6Q6NYC1 403 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 USP51Q70EK9 711 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 SERPINA11Q86U17 422 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 C10orf111Q8N326 155 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 METTL25Q8N6Q8 603 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 FAM86B1Q8N7N1 296 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 TSPAN14Q8NG11 270 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 M1APQ8TC57 530 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 COQ8BQ96D53 544 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 FAM120BQ96EK7 910 aaKnown RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 AURKBQ96GD4 344 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 THOC3Q96J01 351 aaKnown RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 SMAD5Q99717 465 aaKnown RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 FAIM2Q9BWQ8 316 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 ALOXE3Q9BYJ1 711 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 ZNF552Q9H707 407 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 MMP25Q9NPA2 562 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 ADAP2Q9NPF8 381 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 SMPD3Q9NY59 655 aaPredicted RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 C5AR2Q9P296 337 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 DNAJB9Q9UBS3 223 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 MYRFQ9Y2G1 1151 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 SMG1Q96Q15 3661 aaKnown RBP8.22□□□□□ -1.09
SMAD4-217ENST00000611848 BSNQ9UPA5 3926 aa8.22□□□□□ -1.09
SMAD4-217ENST00000611848 MYOCOSA0A1B0GUC4 107 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 GNG14A0A1W2PPG7 69 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 C1orf226A1L170 272 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 SAGE2PA6NJ88 616 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 H0YAE9 185 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 TGFBR3LH3BV60 316 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 SCAMP2O15127 329 aaKnown RBP8.21□□□□□ -1.09
SMAD4-217ENST00000611848 PCDH7O60245 1069 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 LDB3O75112 727 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 LRATO95237 230 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 GPR75O95800 540 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 HPRP00739 348 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 ALPPP05187 535 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 GSNP06396 782 aa8.21□□□□□ -1.09
SMAD4-217ENST00000611848 GNAO1P09471 354 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms