RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 VPS26BQ4G0F5 336 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 CYP27C1Q4G0S4 372 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 ATP6AP1LQ52LC2 224 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 EMC4Q5J8M3 183 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 BICRALQ6AI39 1079 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 NUDCD3Q8IVD9 361 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 OR7G2Q8NG99 324 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 TWIST2Q8WVJ9 160 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 HGDQ93099 445 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 LRRC46Q96FV0 321 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 ZNF764Q96H86 408 aaPredicted RBP13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 VSTM2LQ96N03 204 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 AMDHD1Q96NU7 426 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SPOCK3Q9BQ16 436 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 CENPHQ9H3R5 247 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 REEP4Q9H6H4 257 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SDHAF3Q9NRP4 125 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SH3BP4Q9P0V3 963 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SLC17A7Q9P2U7 560 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 C19orf53Q9UNZ5 99 aaPredicted RBP13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 DNAJC15Q9Y5T4 150 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 CENPEQ02224 2701 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SNPHO15079 494 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CHRNGP07510 517 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 IFI6P09912 130 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CT45A8P0DMV1 189 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CT45A9P0DMV2 189 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 SSTR2P30874 369 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 HPCAL1P37235 193 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 MC3RP41968 323 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 ZFP36L2P47974 494 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 MANFP55145 182 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CORO7P57737 925 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 KIAA0040Q15053 153 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CT45A2Q5DJT8 189 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 KIRREL3Q8IZU9 778 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 OR2L13Q8N349 312 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 MARVELD2Q8N4S9 558 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 SIMC1Q8NDZ2 872 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 OR14L1PQ8NHC6 308 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CEP70Q8NHQ1 597 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 AGR3Q8TD06 166 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 GFM2Q969S9 779 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 MTERF3Q96E29 417 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 ELP4Q96EB1 424 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 TSSK3Q96PN8 268 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 NODALQ96S42 347 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 PRPF18Q99633 342 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 MECRQ9BV79 373 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 GLIPR2Q9H4G4 154 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 ANKRA2Q9H9E1 313 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 HHATLQ9HCP6 504 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 TNFRSF12AQ9NP84 129 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 SPRR3Q9UBC9 169 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 EXO1Q9UQ84 846 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 CCL27Q9Y4X3 112 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 HRH3Q9Y5N1 445 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 PCNX1Q96RV3 2341 aa13.17□□□□□ -0.3
PKNOX1-210ENST00000607049 FAM90A27PA6NNH2 459 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 HSPB2A8KAH6 182 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 PIP5K1BO14986 540 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 LSM1O15116 133 aaKnown RBP13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 AKAP10O43572 662 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 KCNH1O95259 989 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 HSPA4LO95757 839 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 ACTL6AO96019 429 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 BPGMP07738 259 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 GLI4P10075 376 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 PTPN6P29350 595 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 HSPB3Q12988 150 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 RCAN2Q14206 197 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 HSPB2Q16082 182 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 RFTN2Q52LD8 501 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 AAGABQ6PD74 315 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 Q6ZSR9 355 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 PLCZ1Q86YW0 608 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 CCDC71Q8IV32 467 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 ULK2Q8IYT8 1036 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 NATD1Q8N6N6 113 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 ABTB1Q969K4 478 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 EGLN2Q96KS0 407 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 TIMP4Q99727 224 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 UBQLN3Q9H347 655 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 GALNT9Q9HCQ5 603 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 SSU72Q9NP77 194 aaKnown RBP13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 ATAD3AQ9NVI7 634 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 CBLCQ9ULV8 474 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 MAPRE3Q9UPY8 281 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 WIF1Q9Y5W5 379 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 PTGDR2Q9Y5Y4 395 aa13.16□□□□□ -0.3
PKNOX1-210ENST00000607049 ZNF407Q9C0G0 2248 aa13.15□□□□□ -0.3
PKNOX1-210ENST00000607049 UPK1AO00322 258 aa13.15□□□□□ -0.3
PKNOX1-210ENST00000607049 TM9SF1O15321 606 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms