RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 RDH11Q8TC12 318 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ACMSDQ8TDX5 336 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 NINJ1Q92982 152 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 EXOSC8Q96B26 276 aaKnown RBP6.93□□□□□ -1.3
CUX1-219ENST00000606749 L3HYPDHQ96EM0 354 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SLC35A4Q96G79 324 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 BTBD9Q96Q07 612 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 UCN2Q96RP3 112 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ADOQ96SZ5 270 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 FOXC2Q99958 501 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 TUBA1CQ9BQE3 449 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 OR2B2Q9GZK3 357 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 CXXC4Q9H2H0 198 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 CLEC4MQ9H2X3 399 aaPredicted RBP6.93□□□□□ -1.3
CUX1-219ENST00000606749 PFDN4Q9NQP4 134 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 SLC35C2Q9NQQ7 365 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 CCM2LQ9NUG4 571 aaPredicted RBP6.93□□□□□ -1.3
CUX1-219ENST00000606749 SIRT5Q9NXA8 310 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 KLRF1Q9NZS2 232 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 JKAMPQ9P055 326 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 DCDC2Q9UHG0 476 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 ST6GALNAC2Q9UJ37 374 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 MAPRE3Q9UPY8 281 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 MRPS18CQ9Y3D5 142 aaKnown RBP6.93□□□□□ -1.3
CUX1-219ENST00000606749 CCDC168Q8NDH2 2452 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 KIAA1549Q9HCM3 1950 aa6.93□□□□□ -1.3
CUX1-219ENST00000606749 MPDZO75970 2070 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 PRRC2AP48634 2157 aaKnown RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 EXPH5Q8NEV8 1989 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 A0A1W2PPM1 405 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 UBFD1O14562 309 aaKnown RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 ERN1O75460 977 aaKnown RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 RCBTB2O95199 551 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 ANXA4P09525 319 aaPredicted RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 FAM153BP0C7A2 387 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TMIGD3P0DMS9 266 aaPredicted RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 CYP4B1P13584 511 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TACR1P25103 407 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 SRD5A2P31213 254 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TIA1P31483 386 aaKnown RBP eCLIP6.92□□□□□ -1.32e-8■■■■■ 40
CUX1-219ENST00000606749 GCKP35557 465 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 GSTM5P46439 218 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 STARP49675 285 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 LHX2P50458 406 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 PNLIPRP2P54317 469 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 GAS1P54826 345 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 FOXA1P55317 472 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 GFRA1P56159 465 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 FOXF2Q12947 444 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 LCP2Q13094 533 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 PRSS53Q2L4Q9 553 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 ERCC6LQ2NKX8 1250 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 FAM153CQ494X1 144 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 SPDYAQ5MJ70 313 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 OR5M10Q6IEU7 315 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 ENPP6Q6UWR7 440 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 PLXDC2Q6UX71 529 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 NPSR1Q6W5P4 371 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 LARP4Q71RC2 724 aaKnown RBP eCLIP6.92□□□□□ -1.3
CUX1-219ENST00000606749 ADGRE4PQ86SQ3 457 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 CDC20BQ86Y33 519 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 SLC44A2Q8IWA5 706 aaPredicted RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 IFT20Q8IY31 132 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 OR7G2Q8NG99 324 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 OR4N2Q8NGD1 307 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 LINC01560Q8TB33 94 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.92□□□□□ -1.3
CUX1-219ENST00000606749 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 RNF138Q8WVD3 245 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 WNT2BQ93097 391 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 RMND5BQ96G75 393 aaPredicted RBP6.92□□□□□ -1.3
CUX1-219ENST00000606749 VSTM2LQ96N03 204 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 KCNA7Q96RP8 456 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TMUB1Q9BVT8 246 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 EBPLQ9BY08 206 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TXLNGYQ9BZA5 131 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 GSTO2Q9H4Y5 243 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 FOLH1BQ9HBA9 442 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 MID1IP1Q9NPA3 183 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 GIMAP4Q9NUV9 329 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TAS2R10Q9NYW0 307 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TAS2R9Q9NYW1 312 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 TAS2R7Q9NYW3 318 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 FBXL2Q9UKC9 423 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 EDARQ9UNE0 448 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 STK38LQ9Y2H1 464 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 WIF1Q9Y5W5 379 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 SPG11Q96JI7 2443 aa6.92□□□□□ -1.3
CUX1-219ENST00000606749 MED12Q93074 2177 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 A0A087WV62 115 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CCDC151A5D8V7 595 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CLCA1A8K7I4 914 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 MYO1GB0I1T2 1018 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 B4DXG7 233 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 EEF1E1-BLOC1S5C9J1V9 151 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 G3V2L1 256 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 H0Y3Z8 333 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 PLOD2O00469 737 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms