RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 PSMD4P55036 377 aaKnown RBP21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 ABCE1P61221 599 aaKnown RBP21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 SF3B4Q15427 424 aaKnown RBP eCLIP21.75■■□□□ 1.073e-6■■■■□ 22.3
SSX2IP-209ENST00000603677 GALNTL6Q49A17 601 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 VPS26BQ4G0F5 336 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 C6orf136Q5SQH8 315 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 BEND6Q5SZJ8 279 aaPredicted RBP21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 TIGD3Q6B0B8 471 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 TMEM64Q6YI46 380 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 ACAD11Q709F0 780 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 CD163Q86VB7 1156 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 PRPF18Q99633 342 aaKnown RBP21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 UBQLN3Q9H347 655 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 RUBCNLQ9H714 662 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 KCNK9Q9NPC2 374 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 ATAD3AQ9NVI7 634 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 ASIC5Q9NY37 505 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 COQ3Q9NZJ6 369 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 ATP6V1HQ9UI12 483 aa21.75■■□□□ 1.07
SSX2IP-209ENST00000603677 UNC79Q9P2D8 2635 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 TMEM233B4DJY2 109 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 UPK1AO00322 258 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 TSPAN2O60636 221 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 ARRB2P32121 409 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 ADORA2A-AS1P86434 159 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 CHI3L2Q15782 390 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 GXYLT1Q4G148 440 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 WLSQ5T9L3 541 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 ZCCHC12Q6PEW1 402 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 PRR22Q8IZ63 422 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 SIMC1Q8NDZ2 872 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 NEIL3Q8TAT5 605 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 TSSK3Q96PN8 268 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 OSBPL11Q9BXB4 747 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 Q9N2J8 555 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 EIF3LQ9Y262 564 aaKnown RBP21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 C15orf41Q9Y2V0 281 aa21.74■■□□□ 1.07
SSX2IP-209ENST00000603677 UGT2B11O75310 529 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 REM1O75628 298 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 CBR3O75828 277 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 PRPS1L1P21108 318 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 GDF1P27539 372 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 IL12BP29460 328 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 MC3RP41968 323 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 MANFP55145 182 aaKnown RBP21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 C21orf58P58505 322 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 PSG6Q00889 435 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 TMEM107Q6UX40 140 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 LIX1Q8N485 282 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 OR1J4Q8NGS1 313 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 RAB3IL1Q8TBN0 382 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 RNF138Q8WVD3 245 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 ASB5Q8WWX0 329 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 HOXB13Q92826 284 aaPredicted RBP21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 TMBIM1Q969X1 311 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 JSRP1Q96MG2 331 aaPredicted RBP21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 LMF2Q9BU23 707 aaKnown RBP21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 SH3BP4Q9P0V3 963 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 MRPS18CQ9Y3D5 142 aaKnown RBP21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 OR10H1Q9Y4A9 318 aa21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 PHF3Q92576 2039 aaKnown RBP21.73■■□□□ 1.07
SSX2IP-209ENST00000603677 NPIPA2E9PIF3 369 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 NPIPA3F8WFD2 350 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 ICOSLGO75144 302 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 PEX11AO75192 247 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 CLDN14O95500 239 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 RFPL3SP0C7P2 107 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 SLC1A6P48664 564 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 CDK9P50750 372 aaKnown RBP21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 RPL14P50914 215 aaKnown RBP21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 EMX2Q04743 252 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 NNATQ16517 81 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 PRSS53Q2L4Q9 553 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 ZNF630Q2M218 657 aaPredicted RBP21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 NHSL2Q5HYW2 709 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 EMC4Q5J8M3 183 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 FNDC7Q5VTL7 733 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 SLC44A2Q8IWA5 706 aaPredicted RBP21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 FNDC5Q8NAU1 212 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 AGR3Q8TD06 166 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 TUBGCP3Q96CW5 907 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 EXO5Q9H790 373 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 KLRF1Q9NZS2 232 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 ACAD8Q9UKU7 415 aa21.72■■□□□ 1.07
SSX2IP-209ENST00000603677 PRAMEF25A6NGN4 478 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 SNPHO15079 494 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 SCAMP2O15127 329 aaKnown RBP21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 ACVR2AP27037 513 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 GPC1P35052 558 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 GCKP35557 465 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 STX3Q13277 289 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 DECR1Q16698 335 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 HHATQ5VTY9 493 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 LARP4Q71RC2 724 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 PM20D2Q8IYS1 436 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 CDRT4Q8N9R6 151 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 RND1Q92730 232 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 GFM2Q969S9 779 aaKnown RBP21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 NODALQ96S42 347 aa21.71■■□□□ 1.07
SSX2IP-209ENST00000603677 ANKRA2Q9H9E1 313 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms