RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 DEFA1P59665 94 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 DEFA3P59666 94 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 DGCR6Q14129 220 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 TTLL4Q14679 1199 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 HIST2H2ACQ16777 129 aaPredicted RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 PLAG1Q6DJT9 500 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 ABLIM2Q6H8Q1 611 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 GDPD3Q7L5L3 318 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC26A9Q7LBE3 791 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC46A3Q7Z3Q1 461 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 ANKRD46Q86W74 232 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 CPXM2Q8N436 756 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 TXNDC5Q8NBS9 432 aaKnown RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 NLGN2Q8NFZ4 835 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 OR1M1Q8NGA1 313 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 OR6Q1Q8NGQ2 317 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 RHOXF1Q8NHV9 184 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 WFIKKN2Q8TEU8 576 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 CLEC4CQ8WTT0 213 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 PHF10Q8WUB8 498 aaKnown RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 NSMAFQ92636 917 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 RBPMSQ93062 196 aaKnown RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 HAVCR1Q96D42 359 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 PPP1R16AQ96I34 528 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 SERAC1Q96JX3 654 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 RILPQ96NA2 401 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 DPH1Q9BZG8 443 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 EQTNQ9NQ60 294 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 NIT2Q9NQR4 276 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 FRRS1LQ9P0K9 344 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 COPZ2Q9P299 210 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 NAGKQ9UJ70 344 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 NOCTQ9UK39 431 aaKnown RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 ELF5Q9UKW6 265 aaPredicted RBP4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 HEG1Q9ULI3 1381 aa4.73□□□□□ -1.65
SPTBN1-206ENST00000602898 FABP12A6NFH5 140 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GRXCR1A8MXD5 290 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 KRBOX1C9JBD0 128 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 EIF3GO75821 320 aaKnown RBP eCLIP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CNTN5O94779 1100 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SCELO95171 688 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GLP2RO95838 553 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF806P0C7X5 589 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SPI1P17947 270 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 PRPS1L1P21108 318 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 PSMB4P28070 264 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 BDKRB2P30411 391 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 AVPR1AP37288 418 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CHRNA4P43681 627 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 PSMD8P48556 350 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CNN1P51911 297 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF45Q02386 682 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 AIMP2Q13155 320 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ORC2Q13416 577 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 IRF4Q15306 451 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SNAPC1Q16533 368 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CALCRLQ16602 461 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 PABPC1L2AQ5JQF8 200 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CLLU1Q5K131 121 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 TTC23Q5W5X9 447 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 RGS7BPQ6MZT1 257 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 EFCAB12Q6NXP0 572 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 RSPO2Q6UXX9 243 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SNX29P2Q8IUI4 249 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GHDCQ8N2G8 530 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 FAM89BQ8N5H3 189 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 LRRC57Q8N9N7 239 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 Q8NA96 180 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 KIAA0895Q8NCT3 520 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 STXBP6Q8NFX7 210 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OR51L1Q8NGJ5 315 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 DLG3Q92796 817 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OTUB2Q96DC9 234 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC41A3Q96GZ6 507 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 TMEM176AQ96HP8 235 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 C2orf88Q9BSF0 95 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SOX7Q9BT81 388 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ALG12Q9BV10 488 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 YTHDF1Q9BYJ9 559 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ACTR6Q9GZN1 396 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 DERL2Q9GZP9 239 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 EPHX3Q9H6B9 360 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 MEAF6Q9HAF1 191 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 MYOZ1Q9NP98 299 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ASCL3Q9NQ33 180 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 FBXO6Q9NRD1 293 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GTSE1Q9NYZ3 720 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 FBXO5Q9UKT4 447 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 POMPQ9Y244 141 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 AKAP11Q9UKA4 1901 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CDK5RAP2Q96SN8 1893 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 MPTX1A8MV57 137 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC30A4O14863 429 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 STX11O75558 287 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OR2B3O76000 313 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 TSPAN12O95859 305 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 TOP3BO95985 862 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 IFNA6P05013 189 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms