RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 NMRK1Q9NWW6 199 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 TAS2R10Q9NYW0 307 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 MCM8Q9UJA3 840 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 MRPS18CQ9Y3D5 142 aaKnown RBP16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 ZNF780BQ9Y6R6 833 aa16.33■□□□□ 0.2
CHMP2A-208ENST00000601220 CLCA1A8K7I4 914 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 GOSR1O95249 250 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 HSD3B1P14060 373 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 HSD3B2P26439 372 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 SRD5A2P31213 254 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 ALDH9A1P49189 494 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 CORO7P57737 925 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 SRYQ05066 204 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 CKAP4Q07065 602 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 NPSR1Q6W5P4 371 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 KRTAP1-3Q8IUG1 177 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 MMGT1Q8N4V1 131 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 CDYL2Q8N8U2 506 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 ANP32BQ92688 251 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 INTS12Q96CB8 462 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 TMCO6Q96DC7 493 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 ERP27Q96DN0 273 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 ADOQ96SZ5 270 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 TM9SF2Q99805 663 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 ACPTQ9BZG2 426 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 GALNT8Q9NY28 637 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 DLGAP4Q9Y2H0 992 aa16.32■□□□□ 0.2
CHMP2A-208ENST00000601220 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 C17orf51A8MQB3 221 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 POC1B-GALNT4F8VUJ3 575 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 H0Y3Z8 333 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 DLX3O60479 287 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 REM1O75628 298 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 TNFSF13O75888 250 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 BCAS2O75934 225 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 IL3P08700 152 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 DRD2P14416 443 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 ZNF708P17019 499 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 GCAP28676 217 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 HOXC12P31275 282 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 B3GALT5-AS1P59052 145 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 CSTF3Q12996 717 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 PRSS53Q2L4Q9 553 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 ZNF678Q5SXM1 525 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 ENPP6Q6UWR7 440 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 TIFABQ6ZNK6 161 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 IFNEQ86WN2 208 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 NOA1Q8NC60 698 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 WFDC11Q8NEX6 87 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 OR9A2Q8NGT5 310 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 KAT2AQ92830 837 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 ZNF382Q96SR6 550 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 TSPYL1Q9H0U9 437 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 TMEM216Q9P0N5 145 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 WIF1Q9Y5W5 379 aa16.31■□□□□ 0.2
CHMP2A-208ENST00000601220 A8MXE2 369 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 PLOD2O00469 737 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 HCRTR2O43614 444 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 ABCB7O75027 752 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 ERN1O75460 977 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 TGM6O95932 706 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 SNRPAP09012 282 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 CD53P19397 219 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 GCKP35557 465 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 HTR6P50406 440 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 RASA2Q15283 850 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 OR5M10Q6IEU7 315 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 TAOK1Q7L7X3 1001 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 LUZP2Q86TE4 346 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 OR4N2Q8NGD1 307 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 UHMK1Q8TAS1 419 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 C16orf78Q8WTQ4 265 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 APIPQ96GX9 242 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 TMEM237Q96Q45 408 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 DOCK7Q96N67 2140 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 MPDZO75970 2070 aa16.3■□□□□ 0.2
CHMP2A-208ENST00000601220 FLNAP21333 2647 aaKnown RBP16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 PCDH7O60245 1069 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 PLOD3O60568 738 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 SUPT7LO94864 414 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 KRT6AP02538 564 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 KRT6BP04259 564 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 CHMP24386 653 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 KRT6CP48668 564 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 PNLIPRP2P54317 469 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 CLDN15P56746 228 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 GAB1Q13480 694 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 KEAP1Q14145 624 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 EFR3AQ14156 821 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 BCL2A1Q16548 175 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 GALNT18Q6P9A2 607 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 LARP4Q71RC2 724 aaKnown RBP eCLIP16.29■□□□□ 0.25e-6■■■■□ 22.6
CHMP2A-208ENST00000601220 GCNT2Q8N0V5 402 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 GBP7Q8N8V2 638 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 OR7G2Q8NG99 324 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 IFT81Q8WYA0 676 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 FMO2Q99518 471 aa16.29■□□□□ 0.2
CHMP2A-208ENST00000601220 YIPF4Q9BSR8 244 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms