RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MFSD12Q6NUT3 480 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 IGFL2Q6UWQ7 119 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 NPSR1Q6W5P4 371 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 SZRD1Q7Z422 152 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 SNX32Q86XE0 403 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 BEST3Q8N1M1 668 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 DPP10Q8N608 796 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 TP53INP1Q96A56 240 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 BTBD9Q96Q07 612 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 LMF1Q96S06 567 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 LMF2Q9BU23 707 aaKnown RBP17.41■□□□□ 0.38
CCDC9-205ENST00000600117 NXF5Q9H1B4 397 aaKnown RBP17.41■□□□□ 0.38
CCDC9-205ENST00000600117 ZBTB20Q9HC78 741 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-205ENST00000600117 EQTNQ9NQ60 294 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 GPATCH2Q9NW75 528 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 SLAMF8Q9P0V8 285 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 LEF1Q9UJU2 399 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-205ENST00000600117 GPR55Q9Y2T6 319 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-205ENST00000600117 NDUFAF1Q9Y375 327 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 SETD2Q9BYW2 2564 aaPredicted RBP17.4■□□□□ 0.38
CCDC9-205ENST00000600117 A0A096LPI6 279 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 CAPN14A8MX76 684 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 SEMA7AO75326 666 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 ERN1O75460 977 aaKnown RBP17.4■□□□□ 0.38
CCDC9-205ENST00000600117 ITGA10O75578 1167 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 DCTN3O75935 186 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 PDGFAP04085 211 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 HMGN2P05204 90 aaKnown RBP17.4■□□□□ 0.38
CCDC9-205ENST00000600117 RNF224P0DH78 156 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 CT45A8P0DMV1 189 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 CT45A9P0DMV2 189 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 ACP2P11117 423 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 DRD5P21918 477 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 DCAF7P61962 342 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 PSG6Q00889 435 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 TP53BP2Q13625 1128 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 MAPRE2Q15555 327 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 CT45A2Q5DJT8 189 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 C6orf10Q5SRN2 563 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 ABHD17BQ5VST6 288 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 HLA-DQA1Q5Y7H0 255 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 LYPD8Q6UX82 237 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 LINC00696Q6ZRV3 163 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 ZNF621Q6ZSS3 439 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 C6orf120Q7Z4R8 191 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 WDR53Q7Z5U6 358 aaPredicted RBP17.4■□□□□ 0.38
CCDC9-205ENST00000600117 MSRB3Q8IXL7 192 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 NEURL3Q96EH8 262 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 C16orf58Q96GQ5 468 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 RASL10BQ96S79 203 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 SLC35A5Q9BS91 424 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 SERHL2Q9H4I8 314 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 MAP10Q9P2G4 905 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 TEKT2Q9UIF3 430 aa17.4■□□□□ 0.38
CCDC9-205ENST00000600117 YARS2Q9Y2Z4 477 aaKnown RBP17.4■□□□□ 0.38
CCDC9-205ENST00000600117 TNRC6AQ8NDV7 1962 aaKnown RBP17.4■□□□□ 0.38
CCDC9-205ENST00000600117 TRBV5-3A0A0A0MS03 114 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 LOC100653049A0A140TA62 436 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 A1L4Q6 167 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 FRG2CA6NGY1 282 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 TTLL8A6PVC2 850 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 ANGPT2O15123 496 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 TO15178 435 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 OR2J2O76002 312 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 KRT34O76011 436 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 COX4I1P13073 169 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 ST13P50502 369 aaKnown RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 NR0B1P51843 470 aaKnown RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 CORO7P57737 925 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 CYLC2Q14093 348 aaPredicted RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 LASP1Q14847 261 aaKnown RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 NNATQ16517 81 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 ZNF468Q5VIY5 522 aaPredicted RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 FAM91A1Q658Y4 838 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 ZCCHC12Q6PEW1 402 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 DLEU7Q6UYE1 221 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 POU5F2Q8N7G0 328 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 RP9Q8TA86 221 aaKnown RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 CPT1CQ8TCG5 803 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 ZFP90Q8TF47 636 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 LCORQ96JN0 433 aaPredicted RBP17.39■□□□□ 0.37
CCDC9-205ENST00000600117 LRRC37BQ96QE4 947 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 SLC25A37Q9NYZ2 338 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 STMN3Q9NZ72 180 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 PCDHB14Q9Y5E9 798 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 PCDHGB7Q9Y5F8 929 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 ITPR3Q14573 2671 aa17.39■□□□□ 0.37
CCDC9-205ENST00000600117 CELSR1Q9NYQ6 3014 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 TTC36A6NLP5 189 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 BBIP1A8MTZ0 92 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 NKX2-2O95096 273 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 ALPPP05187 535 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 TRHRP34981 398 aaPredicted RBP17.38■□□□□ 0.37
CCDC9-205ENST00000600117 MAN2A2P49641 1150 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 PRIM2P49643 509 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 SSR4P51571 173 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 COQ5Q5HYK3 327 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 ZNF787Q6DD87 383 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 CDC73Q6P1J9 531 aa17.38■□□□□ 0.37
CCDC9-205ENST00000600117 BHLHB9Q6PI77 547 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms