RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 LETMD1Q6P1Q0 360 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 FAM111BQ6SJ93 734 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 GRAMD2AQ8IUY3 354 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 SLC22A9Q8IVM8 553 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 TRIM42Q8IWZ5 723 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 POM121Q96HA1 1249 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 SFXN2Q96NB2 322 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 NODALQ96S42 347 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 ZNF382Q96SR6 550 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 TUBA1CQ9BQE3 449 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 GALNT9Q9HCQ5 603 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 SDHAF3Q9NRP4 125 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 EHD3Q9NZN3 535 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 MRTO4Q9UKD2 239 aaKnown RBP15.88■□□□□ 0.13
HOMER3-210ENST00000599097 DLGAP4Q9Y2H0 992 aa15.88■□□□□ 0.13
HOMER3-210ENST00000599097 GPR55Q9Y2T6 319 aaPredicted RBP15.88■□□□□ 0.13
HOMER3-210ENST00000599097 POC1B-GALNT4F8VUJ3 575 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 LINC01387J3KSC0 135 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 PCDH7O60245 1069 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 DIAPH2O60879 1101 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 SUPT7LO94864 414 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 ENO1P06733 434 aaKnown RBP15.87■□□□□ 0.13
HOMER3-210ENST00000599097 PCSK2P16519 638 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 EMDP50402 254 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 PNLIPRP2P54317 469 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 HMGCS1Q01581 520 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 SRYQ05066 204 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 CLCQ05315 142 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 BCL2A1Q16548 175 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 GLE1Q53GS7 698 aaKnown RBP15.87■□□□□ 0.13
HOMER3-210ENST00000599097 TRMT12Q53H54 448 aaKnown RBP15.87■□□□□ 0.13
HOMER3-210ENST00000599097 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 DCST1Q5T197 706 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 GPRIN3Q6ZVF9 776 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 ADGRE4PQ86SQ3 457 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 FAM9CQ8IZT9 166 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 C9orf106Q8NAJ2 232 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 OR4K17Q8NGC6 315 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 TMBIM1Q969X1 311 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 CNRIP1Q96F85 164 aaPredicted RBP15.87■□□□□ 0.13
HOMER3-210ENST00000599097 FARSBQ9NSD9 589 aaKnown RBP15.87■□□□□ 0.13
HOMER3-210ENST00000599097 BEX4Q9NWD9 120 aaPredicted RBP15.87■□□□□ 0.13
HOMER3-210ENST00000599097 OR10H1Q9Y4A9 318 aa15.87■□□□□ 0.13
HOMER3-210ENST00000599097 EXOC1LA0A1B0GW35 172 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 SH3D21A4FU49 640 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 FAM171A2A8MVW0 826 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 H3BQF6 201 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 MANBAO00462 879 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 ARHGEF9O43307 516 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 OR4F21O95013 312 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 ATE1O95260 518 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 CLK3P49761 638 aaKnown RBP15.86■□□□□ 0.13
HOMER3-210ENST00000599097 PSMD4P55036 377 aaKnown RBP15.86■□□□□ 0.13
HOMER3-210ENST00000599097 PKNOX1P55347 436 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 GFRA1P56159 465 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 FOXD4Q12950 439 aaPredicted RBP15.86■□□□□ 0.13
HOMER3-210ENST00000599097 GANABQ14697 944 aaKnown RBP15.86■□□□□ 0.13
HOMER3-210ENST00000599097 ZNF628Q5EBL2 1059 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 LARP4Q71RC2 724 aaKnown RBP eCLIP15.86■□□□□ 0.13
HOMER3-210ENST00000599097 P4HA3Q7Z4N8 544 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 BIVMQ86UB2 503 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 MEIOBQ8N635 442 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 CDYL2Q8N8U2 506 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 WDSUB1Q8N9V3 476 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 METTL6Q8TCB7 284 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 ZNF681Q96N22 645 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 LIME1Q9H400 295 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 GALNT8Q9NY28 637 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 CLCF1Q9UBD9 225 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 STOML1Q9UBI4 398 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 DOCK7Q96N67 2140 aa15.86■□□□□ 0.13
HOMER3-210ENST00000599097 NIPBLQ6KC79 2804 aaeCLIP15.86■□□□□ 0.13
HOMER3-210ENST00000599097 FLNAP21333 2647 aaKnown RBP15.85■□□□□ 0.13
HOMER3-210ENST00000599097 PLOD2O00469 737 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 MSTNO14793 375 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 PLOD3O60568 738 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 PEPDP12955 493 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 ATP5F1P24539 256 aaPredicted RBP15.85■□□□□ 0.13
HOMER3-210ENST00000599097 HSD17B3P37058 310 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 PTGDSP41222 190 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 CDH13P55290 713 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 DSCR4P56555 118 aaPredicted RBP15.85■□□□□ 0.13
HOMER3-210ENST00000599097 MRPS35P82673 323 aaKnown RBP15.85■□□□□ 0.13
HOMER3-210ENST00000599097 LCP2Q13094 533 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 ZNHIT3Q15649 155 aaPredicted RBP15.85■□□□□ 0.13
HOMER3-210ENST00000599097 LUZP2Q86TE4 346 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 MMGT1Q8N4V1 131 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 LINC01560Q8TB33 94 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 RDH11Q8TC12 318 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 DCAKDQ8WVC6 231 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 IFT81Q8WYA0 676 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 INTS12Q96CB8 462 aaKnown RBP15.85■□□□□ 0.13
HOMER3-210ENST00000599097 CCDC126Q96EE4 140 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 VSTM2LQ96N03 204 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 BBS4Q96RK4 519 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 ADOQ96SZ5 270 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 PTGES2Q9H7Z7 377 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 SLC35C2Q9NQQ7 365 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 ZNF226Q9NYT6 803 aa15.85■□□□□ 0.13
HOMER3-210ENST00000599097 PPP4R1LQ9P1A2 415 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms