RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 VSTM2LQ96N03 204 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 TRNT1Q96Q11 434 aaKnown RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 ZNF607Q96SK3 696 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 CACYBPQ9HB71 228 aaKnown RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 RPS6KA6Q9UK32 745 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 KLK13Q9UKR3 277 aa14.36□□□□□ -0.11
UPF1-206ENST00000598471 PPIEQ9UNP9 301 aaKnown RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 SAMD4AQ9UPU9 718 aaKnown RBP14.36□□□□□ -0.11
UPF1-206ENST00000598471 A8MVJ9 347 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 FKBP6O75344 327 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 ENTPD5O75356 428 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 SEC24DO94855 1032 aaPredicted RBP14.35□□□□□ -0.11
UPF1-206ENST00000598471 CLPSP04118 112 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 GPIP06744 558 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 C8BP07358 591 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 LIPCP11150 499 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 PSMA4P25789 261 aaKnown RBP14.35□□□□□ -0.11
UPF1-206ENST00000598471 KDELR2P33947 212 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 GABRA3P34903 492 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 SLC26A5P58743 744 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 PSPHP78330 225 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 ELOAQ14241 798 aaKnown RBP14.35□□□□□ -0.11
UPF1-206ENST00000598471 HEPHL1Q6MZM0 1159 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 ZFP1Q6P2D0 407 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 CCDC80Q76M96 950 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 WDR53Q7Z5U6 358 aaPredicted RBP14.35□□□□□ -0.11
UPF1-206ENST00000598471 RAB43Q86YS6 212 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 HOXB13Q92826 284 aaPredicted RBP14.35□□□□□ -0.11
UPF1-206ENST00000598471 C8orf44Q96CB5 159 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 SPATA5L1Q9BVQ7 753 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 NUDT9Q9BW91 350 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 SCNM1Q9BWG6 230 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 BTBD2Q9BX70 525 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 ITPAQ9BY32 194 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 ZNF700Q9H0M5 742 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
UPF1-206ENST00000598471 ADPRHL2Q9NX46 363 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 OR10H1Q9Y4A9 318 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 HS3ST3B1Q9Y662 390 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 SPTBN2O15020 2390 aa14.35□□□□□ -0.11
UPF1-206ENST00000598471 PTPRBP23467 1997 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 A0A0G2JPF8 293 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 C2orf92A0A1B0GVN3 265 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 TCRBV3S1A0A5B6 114 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 HNRNPCL2B2RXH8 293 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 HNRNPCL3B7ZW38 293 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 NME6O75414 186 aaPredicted RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 PGM3O95394 542 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 SERPINA1P01009 418 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 HNRNPCL4P0DMR1 293 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 UMPSP11172 480 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 HOXB6P17509 224 aaKnown RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 AQP1P29972 269 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 OTX2P32243 289 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 TRHRP34981 398 aaPredicted RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 MAP3K8P41279 467 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 PPICP45877 212 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 RHDQ02161 417 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 PCOLCEQ15113 449 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 EXT1Q16394 746 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 SYPL1Q16563 259 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 ARHGAP11BQ3KRB8 267 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 DCST2Q5T1A1 773 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 AAGABQ6PD74 315 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 HSDL2Q6YN16 418 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 LRRC74BQ6ZQY2 392 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 ZNF321PQ8N8H1 164 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 CHDHQ8NE62 594 aaPredicted RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 NFAM1Q8NET5 270 aaPredicted RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 LZICQ8WZA0 190 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 NKD1Q969G9 470 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 BTBD9Q96Q07 612 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 GAL3ST4Q96RP7 486 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 WDR77Q9BQA1 342 aaPredicted RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 EFHD1Q9BUP0 239 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 UGT2B28Q9BY64 529 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 SEMA4CQ9C0C4 833 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 GPN2Q9H9Y4 310 aaPredicted RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 BCL2L10Q9HD36 194 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 POLE3Q9NRF9 147 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 DCAF13Q9NV06 445 aaKnown RBP14.34□□□□□ -0.11
UPF1-206ENST00000598471 OLAHQ9NV23 265 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 ANGPTL2Q9UKU9 493 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 PCDHGA6Q9Y5G7 932 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 KNTC1P50748 2209 aa14.34□□□□□ -0.11
UPF1-206ENST00000598471 SPEGQ15772 3267 aa14.33□□□□□ -0.11
UPF1-206ENST00000598471 SDK2Q58EX2 2172 aa14.33□□□□□ -0.11
UPF1-206ENST00000598471 IGHV1-45A0A0A0MS14 117 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 NSG1A0A0A6YYJ2 146 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 A0A1W2PQ72 361 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 DHRS12A0PJE2 317 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 FRG2CA6NGY1 282 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 TERTO14746 1132 aaKnown RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 SERPINB7O75635 380 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 H6PDO95479 791 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 ZNF682O95780 498 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 COX6A1P12074 109 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 ETS2P15036 469 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms