RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 CAPN14A8MX76 684 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 KRT75O95678 551 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 ACP2P11117 423 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 PLCXD2Q0VAA5 305 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 STX5Q13190 355 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 NFYCQ13952 458 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 OR1C1Q15619 314 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 CDC73Q6P1J9 531 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 PCSK4Q6UW60 755 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 RETREG3Q86VR2 466 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 TREML1Q86YW5 311 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 GPALPP1Q8IXQ4 340 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 SLC34A3Q8N130 599 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 OR4N2Q8NGD1 307 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 RP9Q8TA86 221 aaKnown RBP20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 IL1RL2Q9HB29 575 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 SLAMF8Q9P0V8 285 aa20.41■□□□□ 0.86
CHMP2A-204ENST00000597848 BBIP1A8MTZ0 92 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 CDK2AP1O14519 115 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 TO15178 435 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 REM1O75628 298 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 NKX2-2O95096 273 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 COX4I1P13073 169 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 ABCD3P28288 659 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 PTPN6P29350 595 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 KRT20P35900 424 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 CD97P48960 835 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 PSPHP78330 225 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 DUSP5Q16690 384 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 CYP27C1Q4G0S4 372 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 SPINK14Q6IE38 97 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 DHDDSQ86SQ9 333 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 RNF130Q86XS8 419 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 CYP4Z2PQ8N1L4 340 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 HORMAD2Q8N7B1 307 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 FAM13CQ8NE31 585 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 OR5M3Q8NGP4 307 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 PNPT1Q8TCS8 783 aaKnown RBP20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 ZFP90Q8TF47 636 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 PIK3R3Q92569 461 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 TMBIM1Q969X1 311 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 SPACA9Q96E40 222 aaPredicted RBP20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 OMA1Q96E52 524 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 TPT1P8Q9HAU6 139 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 RYDENQ9NUL5 291 aaKnown RBP20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 CBLCQ9ULV8 474 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 CSAG2Q9Y5P2 127 aa20.4■□□□□ 0.86
CHMP2A-204ENST00000597848 GXYLT2A0PJZ3 443 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 FBP2O00757 339 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 MRASO14807 208 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 C1QCP02747 245 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 FBXO45P0C2W1 286 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 MAP3K8P41279 467 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 RFX3P48380 749 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 TMED10P49755 219 aaKnown RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 TNFSF10P50591 281 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 DECR1Q16698 335 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 LRIF1Q5T3J3 769 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 REP15Q6BDI9 236 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 TNFAIP8L2Q6P589 184 aaPredicted RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 LYPD8Q6UX82 237 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 DPP10Q8N608 796 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 RBMXL3Q8N7X1 1067 aaKnown RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 COX18Q8N8Q8 333 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 DNAJB8Q8NHS0 232 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 HOXB13Q92826 284 aaPredicted RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 CDS1Q92903 461 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 TMEM125Q96AQ2 219 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 RMND5BQ96G75 393 aaPredicted RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 SLC35A4Q96G79 324 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 AURKBQ96GD4 344 aaPredicted RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 SIGLEC12Q96PQ1 595 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 OR7D2Q96RA2 312 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 STACQ99469 402 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 OR51I1Q9H343 314 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 PIGUQ9H490 435 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 MRTO4Q9UKD2 239 aaKnown RBP20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 PCDHGB3Q9Y5G1 929 aa20.39■□□□□ 0.85
CHMP2A-204ENST00000597848 TNRC6AQ8NDV7 1962 aaKnown RBP20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 DUXAA6NLW8 204 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 CLIC1O00299 241 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 ATXN7O15265 892 aaPredicted RBP20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 SOX30O94993 753 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 NAGAP17050 411 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 IL12BP29460 328 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 ANXA11P50995 505 aaKnown RBP20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 FBXW4P57775 412 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 ZNF791Q3KP31 576 aaPredicted RBP20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 DLEU7Q6UYE1 221 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 RTL4Q6ZR62 310 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 DND1Q8IYX4 353 aaKnown RBP20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 BCORP1Q8N888 145 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 TEX19Q8NA77 164 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 PCYOX1LQ8NBM8 494 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 OR5D16Q8NGK9 328 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 CMTM5Q96DZ9 223 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 C5orf34Q96MH7 638 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 SERHL2Q9H4I8 314 aa20.38■□□□□ 0.85
CHMP2A-204ENST00000597848 TRIM45Q9H8W5 580 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms