RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ACSF3Q4G176 576 aaPredicted RBP16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 SEM1Q6ZVN7 128 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 LIX1LQ8IVB5 337 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 C10orf107Q8IVU9 208 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 CLYBLQ8N0X4 340 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 OR7G2Q8NG99 324 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 RNF138Q8WVD3 245 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 GATA5Q9BWX5 397 aaPredicted RBP16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 FOLH1BQ9HBA9 442 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 MCCC2Q9HCC0 563 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 MIEF1Q9NQG6 463 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 KLRF1Q9NZS2 232 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 POLR3HQ9Y535 204 aaPredicted RBP16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 ARHGAP21Q5T5U3 1957 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 FREM3P0C091 2139 aa16.36■□□□□ 0.21
CHMP2A-203ENST00000597209 PDZD2O15018 2839 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 COQ9O75208 318 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 ACTL6AO96019 429 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 BMP7P18075 431 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 CEACAM8P31997 349 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 TIMP3P35625 211 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 MRPS22P82650 360 aaKnown RBP16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 TLE4Q04727 773 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 EIPR1Q53HC9 387 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 NPSR1Q6W5P4 371 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 LACC1Q8IV20 430 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 BANPQ8N9N5 519 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 WDSUB1Q8N9V3 476 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 FAM83FQ8NEG4 500 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 DTNBP1Q96EV8 351 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 ZNF764Q96H86 408 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 APOPT1Q96IL0 206 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 UGT2B28Q9BY64 529 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 SENP1Q9P0U3 644 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 C19orf53Q9UNZ5 99 aaPredicted RBP16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 SLC6A5Q9Y345 797 aa16.35■□□□□ 0.21
CHMP2A-203ENST00000597209 AZIN1O14977 448 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 RGS14O43566 566 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 SEC22BO75396 215 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 NEFHP12036 1026 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 NTSP30990 170 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 KRT20P35900 424 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 NCBP2P52298 156 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 CORO7P57737 925 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 TOMM20Q15388 145 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 WIPI1Q5MNZ9 446 aaPredicted RBP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 NSUN5P2Q63ZY6 315 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 CLEC6AQ6EIG7 209 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 TRABD2AQ86V40 505 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 PLCZ1Q86YW0 608 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 CDC26Q8NHZ8 85 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 ABTB1Q969K4 478 aaPredicted RBP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 WDYHV1Q96HA8 205 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 FCRL1Q96LA6 429 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 ADOQ96SZ5 270 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 ROPN1BQ9BZX4 212 aaPredicted RBP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 IQCGQ9H095 443 aaKnown RBP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 GLIPR2Q9H4G4 154 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 ROPN1Q9HAT0 212 aaPredicted RBP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 LRTM1Q9HBL6 345 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 GALNT9Q9HCQ5 603 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 C1orf109Q9NX04 203 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 KCNN3Q9UGI6 736 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 LGALS13Q9UHV8 139 aa16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 MRPS18CQ9Y3D5 142 aaKnown RBP16.34■□□□□ 0.21
CHMP2A-203ENST00000597209 TLDC2A0PJX2 215 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 C2orf72A6NCS6 295 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 CD8B2A6NJW9 211 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 TBX19O60806 448 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 PSMG1O95456 288 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 JUNP05412 331 aaKnown RBP16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 FGF4P08620 206 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 CPN1P15169 458 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 IL12BP29460 328 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 GCKP35557 465 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 VSNL1P62760 191 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 PSG6Q00889 435 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 CYP27C1Q4G0S4 372 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 Q6ZSR9 355 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 LARP4Q71RC2 724 aaKnown RBP eCLIP16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 YRDCQ86U90 279 aaKnown RBP16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 SLC44A2Q8IWA5 706 aaPredicted RBP16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 OR2L13Q8N349 312 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 OR2W6PQ8NHA6 318 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 ZPLD1Q8TCW7 415 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 AMDHD1Q96NU7 426 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 CALHM2Q9HA72 323 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 SERHLQ9NQF3 203 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 MAPRE3Q9UPY8 281 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 CAMK2AQ9UQM7 478 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 WIF1Q9Y5W5 379 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 ADGRG4Q8IZF6 3080 aa16.33■□□□□ 0.2
CHMP2A-203ENST00000597209 CSMD1Q96PZ7 3565 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 TTC36A6NLP5 189 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 UPK1AO00322 258 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 NPHS1O60500 1241 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 NME6O75414 186 aaPredicted RBP16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 CHEK2O96017 543 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 ALDH3A1P30838 453 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms