RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 NAF1Q96HR8 494 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 ART5Q96L15 291 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 A4GALTQ9NPC4 353 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 EXD2Q9NVH0 621 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 P2RX2Q9UBL9 471 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 PRODH2Q9UF12 536 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 C19orf25Q9UFG5 118 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 ERVK-19Q9WJR5 959 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 ANGPT4Q9Y264 503 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 PTRH2Q9Y3E5 179 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 PCDHGB3Q9Y5G1 929 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 TERTO14746 1132 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 ASNA1O43681 348 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 PRAMEF2O60811 474 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 CNOT3O75175 753 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 PSMG1O95456 288 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 DLGAP3O95886 979 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 CBX7O95931 251 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 IFNA14P01570 189 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 IGHEP01854 428 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 TFPTP0C1Z6 253 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 UMPSP11172 480 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 TCN2P20062 427 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 ATP6V1B2P21281 511 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SSTR4P31391 388 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 KDELR2P33947 212 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 UCNP55089 124 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 RIPK1Q13546 671 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 NCF4Q15080 339 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 ZNHIT3Q15649 155 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SFT2D3Q587I9 215 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 MTX3Q5HYI7 312 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 BROXQ5VW32 411 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 REEP3Q6NUK4 255 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 ZNF517Q6ZMY9 492 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 TIPARPQ7Z3E1 657 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 ESX1Q8N693 406 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SIMC1Q8NDZ2 872 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 POP5Q969H6 163 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SPSB2Q99619 263 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SPRY4Q9C004 299 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 OR8D2Q9GZM6 311 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 OR10A5Q9H207 317 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SERHL2Q9H4I8 314 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 POLR1BQ9H9Y6 1135 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 S100A14Q9HCY8 104 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 LIPT1Q9Y234 373 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 CFL2Q9Y281 166 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 PADI2Q9Y2J8 665 aa12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 HEMK1Q9Y5R4 338 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-209ENST00000595803 SEC16AO15027 2179 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 TCRBV3S1A0A5B6 114 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 TTC36A6NLP5 189 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 HRKO00198 91 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 NME6O75414 186 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 RAB40ALP0C0E4 278 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 GABRA3P34903 492 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FOLR3P41439 243 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 MAN2A2P49641 1150 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 EFNA3P52797 238 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FOXL2P58012 376 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 RPS15P62841 145 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 AP2B1P63010 937 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 GABREP78334 506 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 EEF1A2Q05639 463 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 ZNF155Q12901 538 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 MYBPC3Q14896 1274 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FAM198BQ6UWH4 519 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 LANCL3Q6ZV70 420 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 C16orf62Q7Z3J2 963 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 CPEB2Q7Z5Q1 589 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 NLGN4XQ8N0W4 816 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 LGI4Q8N135 537 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 EID3Q8N140 333 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 GOLM1Q8NBJ4 401 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 NLGN4YQ8NFZ3 816 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 OR52E4Q8NGH9 312 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FBXO30Q8TB52 745 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 GPR151Q8TDV0 419 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 SLC38A5Q8WUX1 472 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 OTUB1Q96FW1 271 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 STACQ99469 402 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 PIGUQ9H490 435 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FOLH1BQ9HBA9 442 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 GIN1Q9NXP7 522 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FOXJ2Q9P0K8 574 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 RPS6KA6Q9UK32 745 aa12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 FARSAQ9Y285 508 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-209ENST00000595803 NUP210LQ5VU65 1888 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 M0QX08 132 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 RAD1O60671 282 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 KRT36O76013 467 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 PDE9AO76083 593 aa12.13□□□□□ -0.47
SHKBP1-209ENST00000595803 ATP6V1G2O95670 118 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms