RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 IL12BP29460 328 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 RFC3P40938 356 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 CASP3P42574 277 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 PSMD4P55036 377 aaKnown RBP13.8□□□□□ -0.2
UPF1-202ENST00000594243 MRPS22P82650 360 aaKnown RBP13.8□□□□□ -0.2
UPF1-202ENST00000594243 SNTA1Q13424 505 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 EFR3AQ14156 821 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 HYAL4Q2M3T9 481 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.8□□□□□ -0.2
UPF1-202ENST00000594243 SLC9B1Q4ZJI4 515 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 ANXA8L1Q5VT79 327 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 EPGNQ6UW88 154 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 NPSR1Q6W5P4 371 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 ACAD11Q709F0 780 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 SZRD1Q7Z422 152 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 PACS2Q86VP3 889 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 GHDCQ8N2G8 530 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 CDRT4Q8N9R6 151 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 PSMA8Q8TAA3 256 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 NUDT8Q8WV74 236 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 HGDQ93099 445 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 MOAP1Q96BY2 351 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 SLC35A4Q96G79 324 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 ANGPTL4Q9BY76 406 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 TSPAN10Q9H1Z9 355 aaPredicted RBP13.8□□□□□ -0.2
UPF1-202ENST00000594243 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 ZFP64Q9NPA5 681 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 SLCO1B3Q9NPD5 702 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 AIG1Q9NVV5 245 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 TUBA8Q9NY65 449 aaPredicted RBP13.8□□□□□ -0.2
UPF1-202ENST00000594243 CBLCQ9ULV8 474 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 SNX8Q9Y5X2 465 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 UBR5O95071 2799 aaPredicted RBP13.8□□□□□ -0.2
UPF1-202ENST00000594243 CROCCQ5TZA2 2017 aa13.8□□□□□ -0.2
UPF1-202ENST00000594243 HECTD1Q9ULT8 2610 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 TSPAN2O60636 221 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 UGT2B11O75310 529 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 GLSO94925 669 aaPredicted RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 SOX30O94993 753 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 KCNH1O95259 989 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 C6orf47O95873 294 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 IDO1P14902 403 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 EFNA1P20827 205 aaPredicted RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 KIR3DL1P43629 444 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 CCT3P49368 545 aaKnown RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 PRIM2P49643 509 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 KCNK10P57789 538 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 FOXO1Q12778 655 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 GAB1Q13480 694 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 DECR1Q16698 335 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 GSTA3Q16772 222 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 OR4F3Q6IEY1 312 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 SLC30A6Q6NXT4 461 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 BHLHB9Q6PI77 547 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 MAVSQ7Z434 540 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 FAM109AQ8N4B1 249 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 FAM26EQ8N5C1 309 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 OR4N2Q8NGD1 307 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 JSRP1Q96MG2 331 aaPredicted RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 MS4A4EQ96PG1 132 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 ADOQ96SZ5 270 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 ZBTB18Q99592 522 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 METTL7AQ9H8H3 244 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 PROK2Q9HC23 129 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 MED4Q9NPJ6 270 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 EQTNQ9NQ60 294 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 SIRT3Q9NTG7 399 aaPredicted RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 ZCCHC3Q9NUD5 404 aaKnown RBP13.79□□□□□ -0.2
UPF1-202ENST00000594243 OSGIN2Q9Y236 505 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 GPR45Q9Y5Y3 372 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 MAST4O15021 2626 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 PTPN13Q12923 2485 aa13.79□□□□□ -0.2
UPF1-202ENST00000594243 SPENQ96T58 3664 aaKnown RBP13.78□□□□□ -0.2
UPF1-202ENST00000594243 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 A0A0G2JMM0 328 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 PRSS51A0A1B0GVH4 220 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 A0A1W2PPB8 328 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 A0A1W2PRS3 328 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 FAM166BA8MTA8 275 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 KIR3DP1A8MWS1 328 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 E9PBE3 544 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 UBDO15205 165 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 TRIM3O75382 744 aaPredicted RBP13.78□□□□□ -0.2
UPF1-202ENST00000594243 WISP2O76076 250 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 S100A3P33764 101 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 GABRA3P34903 492 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 UFM1P61960 85 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
UPF1-202ENST00000594243 SLC10A1Q14973 349 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 SPDYE7PQ495Y7 208 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 CMPK2Q5EBM0 449 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 TMEM251Q8N6I4 163 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 GLB1L3Q8NCI6 653 aaPredicted RBP13.78□□□□□ -0.2
UPF1-202ENST00000594243 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 OR52N2Q8NGI0 321 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 GPR151Q8TDV0 419 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 SLC9A6Q92581 669 aa13.78□□□□□ -0.2
UPF1-202ENST00000594243 HOXB13Q92826 284 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms