RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TMEM233B4DJY2 109 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 SNPHO15079 494 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 NPHS1O60500 1241 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 TSPAN2O60636 221 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 TOXO94900 526 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 LINC00032P0C843 101 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 GABRA1P14867 456 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 CREB1P16220 341 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ELAVL4P26378 380 aaKnown RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 NTSP30990 170 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ADH7P40394 386 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ZNF155Q12901 538 aaPredicted RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 SNTA1Q13424 505 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 TOMM20Q15388 145 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 EIPR1Q53HC9 387 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ARL13AQ5H913 290 aaPredicted RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 WIPI1Q5MNZ9 446 aaPredicted RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 TMEM107Q6UX40 140 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 MEX3BQ6ZN04 569 aaKnown RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 RNF165Q6ZSG1 346 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ZCCHC23Q6ZST2 131 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 SLC44A2Q8IWA5 706 aaPredicted RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 ULK2Q8IYT8 1036 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ACBD4Q8NC06 268 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 OR4N2Q8NGD1 307 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 OR1J4Q8NGS1 313 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 GFM2Q969S9 779 aaKnown RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 SLC35A4Q96G79 324 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 METTL2AQ96IZ6 378 aaKnown RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 FCRL1Q96LA6 429 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 ADOQ96SZ5 270 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 SPOCK3Q9BQ16 436 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 STMN4Q9H169 189 aaPredicted RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 SERHLQ9NQF3 203 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
APOC1-208ENST00000592535 TAS2R9Q9NYW1 312 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 Q9UFV3 132 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 MAPRE3Q9UPY8 281 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 PCDHGB3Q9Y5G1 929 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 DNAJC15Q9Y5T4 150 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 A0A087WV62 115 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 COQ9O75208 318 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 CHEK2O96017 543 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 HOXD4P09016 255 aaPredicted RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 NEFHP12036 1026 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 SDC1P18827 310 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 ZFP36L2P47974 494 aaKnown RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 RPL38P63173 70 aaKnown RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 PSG6Q00889 435 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 TFF3Q07654 80 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 RFTN2Q52LD8 501 aaPredicted RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 VASNQ6EMK4 673 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 ANKRD26P1Q6NSI1 321 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 SEM1Q6ZVN7 128 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 LARP4Q71RC2 724 aaKnown RBP eCLIP12.66□□□□□ -0.384e-11■■■■□ 23
APOC1-208ENST00000592535 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 WDSUB1Q8N9V3 476 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 TWIST2Q8WVJ9 160 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 EFHD2Q96C19 240 aaPredicted RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 TMCO6Q96DC7 493 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 TIMP4Q99727 224 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 CCT7Q99832 543 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 UGT2B28Q9BY64 529 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 KCNJ16Q9NPI9 418 aa12.66□□□□□ -0.38
APOC1-208ENST00000592535 C19orf53Q9UNZ5 99 aaPredicted RBP12.66□□□□□ -0.38
APOC1-208ENST00000592535 ABCA12Q86UK0 2595 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 CREBBPQ92793 2442 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 KDM4EB2RXH2 506 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 UPK1AO00322 258 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 PLOD2O00469 737 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 PIP5K1BO14986 540 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 LSM1O15116 133 aaKnown RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 AKAP10O43572 662 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 ABCB7O75027 752 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 SLITRK5O94991 958 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 PSMG1O95456 288 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 FGF4P08620 206 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 IGFBP2P18065 325 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 BMP7P18075 431 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 IL12BP29460 328 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 ARRB2P32121 409 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 KRT20P35900 424 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 WNT3P56703 355 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 EFR3AQ14156 821 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 UGT3A2Q3SY77 523 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 GALNTL6Q49A17 601 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 ACSF3Q4G176 576 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 ZNF385BQ569K4 471 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 NHSL2Q5HYW2 709 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 SH2D4BQ5SQS7 431 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 DCST1Q5T197 706 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 RIPPLY2Q5TAB7 128 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 ZNF551Q7Z340 670 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 WDR53Q7Z5U6 358 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 LIX1LQ8IVB5 337 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 DDIASQ8IXT1 998 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 CLYBLQ8N0X4 340 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 OR2L13Q8N349 312 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms