RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 PIGMQ9H3S5 423 aa9.24□□□□□ -0.93
VMP1-214ENST00000592106 FARSBQ9NSD9 589 aaKnown RBP9.24□□□□□ -0.93
VMP1-214ENST00000592106 ZNF639Q9UID6 485 aa9.24□□□□□ -0.93
VMP1-214ENST00000592106 DTX4Q9Y2E6 619 aa9.24□□□□□ -0.93
VMP1-214ENST00000592106 WIF1Q9Y5W5 379 aa9.24□□□□□ -0.93
VMP1-214ENST00000592106 EXPH5Q8NEV8 1989 aa9.24□□□□□ -0.93
VMP1-214ENST00000592106 NINQ8N4C6 2090 aa9.24□□□□□ -0.93
VMP1-214ENST00000592106 H3BQF6 201 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 MANBAO00462 879 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 UGT2B11O75310 529 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 ULK1O75385 1050 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 RAF1P04049 648 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 ENO1P06733 434 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 IL3P08700 152 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 ABHD2P08910 425 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 EPXP11678 715 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 CPN1P15169 458 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 TSPAN8P19075 237 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 ATP5F1P24539 256 aaPredicted RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 TIA1P31483 386 aaKnown RBP eCLIP9.23□□□□□ -0.93
VMP1-214ENST00000592106 HSD17B3P37058 310 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 NAGLUP54802 743 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 PKNOX1P55347 436 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 NAA20P61599 178 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 MRPS35P82673 323 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 MGAT2Q10469 447 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 ZNF155Q12901 538 aaPredicted RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 GAB1Q13480 694 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 SNTB1Q13884 538 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 DAZAP2Q15038 168 aaPredicted RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 LTB4RQ15722 352 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 CEBPEQ15744 281 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 TRMT12Q53H54 448 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 ZNF678Q5SXM1 525 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 DCST1Q5T197 706 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 PAMR1Q6UXH9 720 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 RPS27LQ71UM5 84 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 CHMP1BQ7LBR1 199 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 CDC20BQ86Y33 519 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 PLCZ1Q86YW0 608 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 TGIF2LYQ8IUE0 185 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 GRAMD2AQ8IUY3 354 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 OR4K17Q8NGC6 315 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 UHMK1Q8TAS1 419 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 RDH11Q8TC12 318 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 METTL6Q8TCB7 284 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 TMBIM1Q969X1 311 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 CNRIP1Q96F85 164 aaPredicted RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 SLC35A4Q96G79 324 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 SFXN2Q96NB2 322 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 BTBD9Q96Q07 612 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 HBEGFQ99075 208 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 RBM24Q9BX46 236 aaKnown RBP9.23□□□□□ -0.93
VMP1-214ENST00000592106 EPB41L4BQ9H329 900 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 GALNT9Q9HCQ5 603 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 SERHLQ9NQF3 203 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 TAS2R10Q9NYW0 307 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 TAS2R9Q9NYW1 312 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 EHD3Q9NZN3 535 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 CBLCQ9ULV8 474 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 DLGAP4Q9Y2H0 992 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 PLEKHA6Q9Y2H5 1048 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 OR10H1Q9Y4A9 318 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 POLQO75417 2590 aa9.23□□□□□ -0.93
VMP1-214ENST00000592106 KDM4EB2RXH2 506 aaPredicted RBP9.22□□□□□ -0.93
VMP1-214ENST00000592106 SLITRK5O94991 958 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 NTSP30990 170 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 MPIP34949 423 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 PTGDSP41222 190 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 EMDP50402 254 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 HMGCS1Q01581 520 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 SRYQ05066 204 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 ZNF763Q0D2J5 394 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 LCP2Q13094 533 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 KEAP1Q14145 624 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 IMPG1Q17R60 797 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 ZNF628Q5EBL2 1059 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 UBAP2Q5T6F2 1119 aaKnown RBP9.22□□□□□ -0.93
VMP1-214ENST00000592106 TIFABQ6ZNK6 161 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 LARP4Q71RC2 724 aaKnown RBP eCLIP9.22□□□□□ -0.93
VMP1-214ENST00000592106 TRMT10CQ7L0Y3 403 aaKnown RBP9.22□□□□□ -0.93
VMP1-214ENST00000592106 P4HA3Q7Z4N8 544 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 TRIM42Q8IWZ5 723 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 CCDC116Q8IYX3 515 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 MMP21Q8N119 569 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 C9orf106Q8NAJ2 232 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 ACMSDQ8TDX5 336 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 EXOSC8Q96B26 276 aaKnown RBP9.22□□□□□ -0.93
VMP1-214ENST00000592106 MBD6Q96DN6 1003 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 CCDC126Q96EE4 140 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 ZNF681Q96N22 645 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 TMEM237Q96Q45 408 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 BBS4Q96RK4 519 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 TUBA1CQ9BQE3 449 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 ACPTQ9BZG2 426 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 MIEF1Q9NQG6 463 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 SDHAF3Q9NRP4 125 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 PPP4R1LQ9P1A2 415 aa9.22□□□□□ -0.93
VMP1-214ENST00000592106 DMGDHQ9UI17 866 aaKnown RBP9.22□□□□□ -0.93
VMP1-214ENST00000592106 MRTO4Q9UKD2 239 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms