RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TFPIP10646 304 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF613Q6PF04 617 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 WDR53Q7Z5U6 358 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 GPALPP1Q8IXQ4 340 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 TMEM163Q8TC26 289 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 DYNC2LI1Q8TCX1 351 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 ZSWIM3Q96MP5 696 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 DPH1Q9BZG8 443 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 CASC3O15234 703 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 CEBPBP17676 345 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 CBLP22681 906 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 EIF2DP41214 584 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 HYAL2Q12891 473 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC14A1Q13336 389 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 CST6Q15828 149 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 NTRK2Q16620 822 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 C6orf132Q5T0Z8 1188 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 RPL13AP3Q6NVV1 102 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 OR10H5Q8NGA6 315 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 YIPF6Q96EC8 236 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 TMEM38AQ9H6F2 299 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 RC3H2Q9HBD1 1191 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 PNO1Q9NRX1 252 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 OR52A4PA6NMU1 304 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 HPGDSO60760 199 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 EPCAMP16422 314 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 NPPBP16860 134 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 FCRLBQ6BAA4 426 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF782Q6ZMW2 699 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC25A36Q96CQ1 311 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 COQ8BQ96D53 544 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 C5orf34Q96MH7 638 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 OR4K3Q96R72 315 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 MTHFD2LQ9H903 347 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 C12orf71A8MTZ7 269 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 CSO75390 466 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 KAT7O95251 611 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 RPS15AP62244 130 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 ATAD3CQ5T2N8 411 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 NOXA1Q86UR1 476 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 PRSS58Q8IYP2 241 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 PIAS4Q8N2W9 510 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 CHFRQ96EP1 664 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 RAD9AQ99638 391 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 FBXO8Q9NRD0 319 aa16.17■□□□□ 0.18
SMARCA4-215ENST00000590574 A8MUA0 341 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 I3L521 148 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 HOXB2P14652 356 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC19A1P41440 591 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 CAV3P56539 151 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF234Q14588 700 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 HNRNPA1L2Q32P51 320 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 PTOV1Q86YD1 416 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ACOT4Q8N9L9 421 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 CHST4Q8NCG5 386 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 B4DGG1 531 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 RNGTTO60942 597 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 GIPRP48546 466 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 CREB3L1Q96BA8 519 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 KXD1Q9BQD3 176 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 MED16Q9Y2X0 877 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 IL1AP01583 271 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ELAVL4P26378 380 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ERP29P30040 261 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF81P51508 661 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ACTC1P68032 377 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ACTA1P68133 377 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 CDK3Q00526 305 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 CTF1Q16619 201 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 LINC00299Q6ZSB3 139 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 VRK2Q86Y07 508 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 GPR135Q8IZ08 494 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 SYT14Q8NB59 555 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 NKD1Q969G9 470 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 HSPA12BQ96MM6 686 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 LYSMD1Q96S90 227 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 GABARAPL3Q9BY60 117 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ARHGAP19Q14CB8 494 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 MSRB3Q8IXL7 192 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 S100A16Q96FQ6 103 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 SLC38A3Q99624 504 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 ALG8Q9BVK2 526 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 AKIP1Q9NQ31 210 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 CLEC2DQ9UHP7 191 aa16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 TMEFF2Q9UIK5 374 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-215ENST00000590574 OR6C74A6NCV1 312 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 HMX3A6NHT5 357 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 FCER2P06734 321 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ACP2P11117 423 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 HSD17B12Q53GQ0 312 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 FAM71E1Q6IPT2 247 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 Q8N9G6 341 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF639Q9UID6 485 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 SPEF1Q9Y4P9 236 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 TPD52L2O43399 206 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 TNFP01375 233 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 AP2S1P53680 142 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 VSX2P58304 361 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF385BQ569K4 471 aa16.15■□□□□ 0.18
SMARCA4-215ENST00000590574 ZNF627Q7L945 461 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms