RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 SNTA1Q13424 505 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 TMEM107Q6UX40 140 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 FCRL1Q96LA6 429 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 COL21A1Q96P44 957 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 SPOCK3Q9BQ16 436 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 GLIPR2Q9H4G4 154 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 TAS2R9Q9NYW1 312 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 SLC6A5Q9Y345 797 aa18.8■□□□□ 0.6
CIRBP-226ENST00000590171 A0A087WV62 115 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 A0A0G2JNJ9 132 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 NPHS1O60500 1241 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 TSPAN2O60636 221 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 COQ9O75208 318 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 TOXO94900 526 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 HOXD4P09016 255 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-226ENST00000590171 LINC00032P0C843 101 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 NEFHP12036 1026 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 NTSP30990 170 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 PSG6Q00889 435 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 ZNF155Q12901 538 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-226ENST00000590171 TOMM20Q15388 145 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 EIPR1Q53HC9 387 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 ARL13AQ5H913 290 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-226ENST00000590171 WIPI1Q5MNZ9 446 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-226ENST00000590171 ZCCHC23Q6ZST2 131 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 LURAP1LQ8IV03 231 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 OR4N2Q8NGD1 307 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 TMCO6Q96DC7 493 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 AMDHD1Q96NU7 426 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 ADOQ96SZ5 270 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 TIMP4Q99727 224 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 TREX2Q9BQ50 279 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-226ENST00000590171 NPDC1Q9NQX5 325 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-226ENST00000590171 Q9UFV3 132 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 MAPRE3Q9UPY8 281 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 DNAJC13O75165 2243 aa18.79■□□□□ 0.6
CIRBP-226ENST00000590171 FBN2P35556 2912 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 UPK1AO00322 258 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 PLOD2O00469 737 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 ABCB7O75027 752 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 SLITRK5O94991 958 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 CHEK2O96017 543 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 FGF4P08620 206 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 SDC1P18827 310 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 RPL38P63173 70 aaKnown RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 UGT3A2Q3SY77 523 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 RFTN2Q52LD8 501 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 ANKRD26P1Q6NSI1 321 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 MEX3BQ6ZN04 569 aaKnown RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 SEM1Q6ZVN7 128 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 SLC44A2Q8IWA5 706 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 WDSUB1Q8N9V3 476 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 FAM83FQ8NEG4 500 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 TWIST2Q8WVJ9 160 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 GFM2Q969S9 779 aaKnown RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 CCT7Q99832 543 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 PRDM14Q9GZV8 571 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 KCNJ16Q9NPI9 418 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 SERHLQ9NQF3 203 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 C19orf53Q9UNZ5 99 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-226ENST00000590171 CACNA1CQ13936 2221 aa18.78■□□□□ 0.6
CIRBP-226ENST00000590171 LSM1O15116 133 aaKnown RBP18.77■□□□□ 0.6
CIRBP-226ENST00000590171 PSMG1O95456 288 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 IGFBP2P18065 325 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 IL12BP29460 328 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 ARRB2P32121 409 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 KRT20P35900 424 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 ZFP36L2P47974 494 aaKnown RBP18.77■□□□□ 0.6
CIRBP-226ENST00000590171 PSPHP78330 225 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 NHSL2Q5HYW2 709 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 DCST1Q5T197 706 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 RIPPLY2Q5TAB7 128 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 VASNQ6EMK4 673 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 LARP4Q71RC2 724 aaKnown RBP eCLIP18.77■□□□□ 0.6
CIRBP-226ENST00000590171 YRDCQ86U90 279 aaKnown RBP18.77■□□□□ 0.6
CIRBP-226ENST00000590171 LIX1LQ8IVB5 337 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 OR2L13Q8N349 312 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 MREGQ8N565 214 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 RNF138Q8WVD3 245 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 EFHD2Q96C19 240 aaPredicted RBP18.77■□□□□ 0.6
CIRBP-226ENST00000590171 TSSK3Q96PN8 268 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 TMEM109Q9BVC6 243 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 UGT2B28Q9BY64 529 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 DDX18Q9NVP1 670 aaKnown RBP18.77■□□□□ 0.6
CIRBP-226ENST00000590171 TRAF6Q9Y4K3 522 aa18.77■□□□□ 0.6
CIRBP-226ENST00000590171 NINQ8N4C6 2090 aa18.77■□□□□ 0.59
CIRBP-226ENST00000590171 PHF3Q92576 2039 aaKnown RBP18.76■□□□□ 0.59
CIRBP-226ENST00000590171 KDM4EB2RXH2 506 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-226ENST00000590171 PIP5K1BO14986 540 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 TYROBPO43914 113 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 BMP7P18075 431 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 MSX1P28360 303 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 PNLIPRP2P54317 469 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 EFR3AQ14156 821 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 GALNTL6Q49A17 601 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 ACSF3Q4G176 576 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-226ENST00000590171 ZNF385BQ569K4 471 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 SH2D4BQ5SQS7 431 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 DDIASQ8IXT1 998 aa18.76■□□□□ 0.59
CIRBP-226ENST00000590171 CLYBLQ8N0X4 340 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms