RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 KLRF1Q9NZS2 232 aa11.13□□□□□ -0.63
VAT1-206ENST00000589709 WBP11Q9Y2W2 641 aaKnown RBP11.13□□□□□ -0.63
VAT1-206ENST00000589709 MRPS18CQ9Y3D5 142 aaKnown RBP11.13□□□□□ -0.63
VAT1-206ENST00000589709 MTORP42345 2549 aa11.13□□□□□ -0.63
VAT1-206ENST00000589709 C2CD3Q4AC94 2353 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 MED13LQ71F56 2210 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 H3BQF6 201 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 TSPAN2O60636 221 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 REM1O75628 298 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 CYP4B1P13584 511 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 CTSSP25774 331 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 MPIP34949 423 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 HTR6P50406 440 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 PNLIPRP2P54317 469 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 WNT3P56703 355 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 EFR3AQ14156 821 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 RCAN2Q14206 197 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 SLC29A2Q14542 456 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 FLYWCH1Q4VC44 716 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 DCST1Q5T197 706 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 FAM219BQ5XKK7 198 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 ENPP6Q6UWR7 440 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 ADGRE4PQ86SQ3 457 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 KIF18BQ86Y91 864 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 PLCZ1Q86YW0 608 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 EIF1ADQ8N9N8 165 aaKnown RBP11.12□□□□□ -0.63
VAT1-206ENST00000589709 OR9A2Q8NGT5 310 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 MZB1Q8WU39 189 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.12□□□□□ -0.63
VAT1-206ENST00000589709 EXOSC8Q96B26 276 aaKnown RBP11.12□□□□□ -0.63
VAT1-206ENST00000589709 ZFP3Q96NJ6 502 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 TRIB1Q96RU8 372 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 POLDIP3Q9BY77 421 aaKnown RBP11.12□□□□□ -0.63
VAT1-206ENST00000589709 GSTO2Q9H4Y5 243 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 PFDN4Q9NQP4 134 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 RASSF1Q9NS23 344 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 PSMC3IPQ9P2W1 217 aaPredicted RBP11.12□□□□□ -0.63
VAT1-206ENST00000589709 EDARQ9UNE0 448 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 TIMM22Q9Y584 194 aa11.12□□□□□ -0.63
VAT1-206ENST00000589709 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
VAT1-206ENST00000589709 ITPR3Q14573 2671 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 MYO1GB0I1T2 1018 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 G3V2L1 256 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 GOLGA8RI6L899 631 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 ERN1O75460 977 aaKnown RBP11.11□□□□□ -0.63
VAT1-206ENST00000589709 SLITRK5O94991 958 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 ANXA4P09525 319 aaPredicted RBP11.11□□□□□ -0.63
VAT1-206ENST00000589709 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 PYGBP11216 843 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 DDCP20711 480 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 SRD5A2P31213 254 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 KRT20P35900 424 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 ART1P52961 327 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 IST1P53990 364 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 GFRA1P56159 465 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 CORO7P57737 925 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 MRPS22P82650 360 aaKnown RBP11.11□□□□□ -0.63
VAT1-206ENST00000589709 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 SCIMPQ6UWF3 145 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 SH2D5Q6ZV89 423 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 TRIM42Q8IWZ5 723 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 FAM9CQ8IZT9 166 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 LRRN4CLQ8ND94 238 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 OR14L1PQ8NHC6 308 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 FAM76AQ8TAV0 307 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.11□□□□□ -0.63
VAT1-206ENST00000589709 KAT2AQ92830 837 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 ADOQ96SZ5 270 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 FOXC2Q99958 501 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 CXXC4Q9H2H0 198 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 CLEC4MQ9H2X3 399 aaPredicted RBP11.11□□□□□ -0.63
VAT1-206ENST00000589709 EPB41L4BQ9H329 900 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 TAS2R10Q9NYW0 307 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 TAS2R9Q9NYW1 312 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 RAB21Q9UL25 225 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 EMCNQ9ULC0 261 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 GRID1Q9ULK0 1009 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 MAPRE3Q9UPY8 281 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 WIF1Q9Y5W5 379 aa11.11□□□□□ -0.63
VAT1-206ENST00000589709 A0A087WV62 115 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 A6NNC1 897 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 PLOD2O00469 737 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 UBFD1O14562 309 aaKnown RBP11.1□□□□□ -0.63
VAT1-206ENST00000589709 GLRA3O75311 464 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 RCBTB2O95199 551 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 CHMP24386 653 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 SLCO1A2P46721 670 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 GAS1P54826 345 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 EEF1A1P68104 462 aaKnown RBP11.1□□□□□ -0.63
VAT1-206ENST00000589709 SORDQ00796 357 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 BTKQ06187 659 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 ZNF763Q0D2J5 394 aa11.1□□□□□ -0.63
VAT1-206ENST00000589709 C2orf80Q0P641 193 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms