RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 CHRM5P08912 532 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TBC1D3HP0C7X1 549 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 CPN2P22792 545 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 MMP11P24347 488 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 FPR3P25089 353 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 GDI1P31150 447 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SDC2P34741 201 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 IGFALSP35858 605 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SLC9A3P48764 834 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 LIMK1P53667 647 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 YPEL5P62699 121 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SKP1P63208 163 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 BNC1Q01954 994 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TNFRSF17Q02223 184 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 BDH1Q02338 343 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SCN1BQ07699 218 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 PIN1Q13526 163 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TPBGQ13641 420 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 NFATC4Q14934 902 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TRAM1Q15629 374 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 MLF2Q15773 248 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 NDUFA5Q16718 116 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 PLK5Q496M5 336 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TBC1D3CQ6IPX1 549 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 ZNF544Q6NX49 715 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 METAP1DQ6UB28 335 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TMEM107Q6UX40 140 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 ZNF793Q6ZN11 406 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 PAQR7Q86WK9 346 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TRIM48Q8IWZ4 208 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 CCDC116Q8IYX3 515 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 CDK20Q8IZL9 346 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TBC1D3Q8IZP1 549 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 RNF113BQ8IZP6 322 aaKnown RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 KLHL36Q8N4N3 616 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 GDPD1Q8N9F7 314 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TMEM145Q8NBT3 493 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 MORN4Q8NDC4 146 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 OR52L1Q8NGH7 329 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 OR52I1Q8NGK6 324 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 OR52P1PQ8NH57 321 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 RSC1A1Q92681 617 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 RERGQ96A58 199 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 ELP4Q96EB1 424 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 RNFT2Q96EX2 444 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 LRR1Q96L50 414 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 RIPOR3Q96MK2 946 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 WDR92Q96MX6 357 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 ZNF582Q96NG8 517 aaPredicted RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 OR5M11Q96RB7 305 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 GABRG3Q99928 467 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 CENPOQ9BU64 300 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SRMSQ9H3Y6 488 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SERHL2Q9H4I8 314 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 XKR8Q9H6D3 395 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 HHATLQ9HCP6 504 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 LYRM4Q9HD34 91 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 TM7SF3Q9NS93 570 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 CES1P1Q9UKY3 287 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 PCOLCE2Q9UKZ9 415 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 ZFR2Q9UPR6 939 aaKnown RBP6.73□□□□□ -1.33
SPIDR-228ENST00000588781 SATB2Q9UPW6 733 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 PCDHGB2Q9Y5G2 931 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 CFAP54Q96N23 3096 aa6.73□□□□□ -1.33
SPIDR-228ENST00000588781 A0A087WV62 115 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 IGKV1-8A0A0C4DH67 115 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 A0A0G2JN53 185 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 BLACEA4D250 179 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 OTOL1A6NHN0 477 aaPredicted RBP6.72□□□□□ -1.33
SPIDR-228ENST00000588781 LRRC72A6NJI9 287 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 OR5K4A6NMS3 321 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 PGRMC2O15173 223 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 RGS5O15539 181 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 TNFSF14O43557 240 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 TPST2O60704 377 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 FMO6PO60774 539 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 B4GALT2O60909 372 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 COQ9O75208 318 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 GPX5O75715 221 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 RCBTB2O95199 551 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 HLA-DPB1P04440 258 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 KRT8P05787 483 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 DBIP07108 87 aaKnown RBP6.72□□□□□ -1.33
SPIDR-228ENST00000588781 CA3P07451 260 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 GUSBP08236 651 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 TRAPPC2P0DI81 140 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 TRAPPC2BP0DI82 140 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 CD53P19397 219 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 CERS1P27544 350 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 GABRA5P31644 462 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 AKT2P31751 481 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 GRK5P34947 590 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 WASP42768 502 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 MTNR1AP48039 350 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 ADPRHP54922 357 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 CDH11P55287 796 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 PPP3R1P63098 170 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 BTN3A2P78410 334 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 ACSM1Q08AH1 577 aa6.72□□□□□ -1.33
SPIDR-228ENST00000588781 MESP2Q0VG99 397 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms