RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 MBD3L5A6NJ08 208 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 EEF1E1-BLOC1S5C9J1V9 151 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 G3V2L1 256 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 EEF1E1O43324 174 aaKnown RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 TSPAN2O60636 221 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 ERN1O75460 977 aaKnown RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 CBR3O75828 277 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 BCAS2O75934 225 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 ACTL6AO96019 429 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 ENO1P06733 434 aaKnown RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 ANXA4P09525 319 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 CYP4B1P13584 511 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 CTSSP25774 331 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 STARP49675 285 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 C2orf80Q0P641 193 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 FOXF2Q12947 444 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.324e-8■■■■■ 30.2
VMP1-206ENST00000587945 ERCC6LQ2NKX8 1250 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 FBXL19-AS1Q494R0 122 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 LARP4Q71RC2 724 aaKnown RBP eCLIP13.04□□□□□ -0.32
VMP1-206ENST00000587945 PLCZ1Q86YW0 608 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 SLC44A2Q8IWA5 706 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 MBD3L2Q8NHZ7 208 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 KIF18AQ8NI77 898 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 EFHD2Q96C19 240 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 SLC35A4Q96G79 324 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 BBS4Q96RK4 519 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 OR2B2Q9GZK3 357 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 CLEC4MQ9H2X3 399 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 CALHM2Q9HA72 323 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 RASSF1Q9NS23 344 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 CCM2LQ9NUG4 571 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 GIMAP4Q9NUV9 329 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 TAS2R10Q9NYW0 307 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 STK38LQ9Y2H1 464 aa13.04□□□□□ -0.32
VMP1-206ENST00000587945 B4DXG7 233 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 H0Y3Z8 333 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 GSTA1P08263 222 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 MYL2P10916 166 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 CPN1P15169 458 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 CD1EP15812 388 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 TACR1P25103 407 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 IL12BP29460 328 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 GCKP35557 465 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 DGKQP52824 942 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 RIPPLY3P57055 190 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 RCAN2Q14206 197 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 CEBPEQ15744 281 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 FLYWCH1Q4VC44 716 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 GALNT18Q6P9A2 607 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 ZYG11AQ6WRX3 759 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 SAMD14Q8IZD0 417 aaPredicted RBP13.03□□□□□ -0.32
VMP1-206ENST00000587945 FAM9CQ8IZT9 166 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 LRRN4CLQ8ND94 238 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 LINC01560Q8TB33 94 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 ZPLD1Q8TCW7 415 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 FAM222BQ8WU58 562 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 ERP27Q96DN0 273 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 LRRC46Q96FV0 321 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 G6PC3Q9BUM1 346 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 SHCBP1LQ9BZQ2 653 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 C12orf65Q9H3J6 166 aaKnown RBP13.03□□□□□ -0.32
VMP1-206ENST00000587945 TNFRSF12AQ9NP84 129 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 SENP1Q9P0U3 644 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 CBLCQ9ULV8 474 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 POLR3HQ9Y535 204 aaPredicted RBP13.03□□□□□ -0.32
VMP1-206ENST00000587945 WIF1Q9Y5W5 379 aa13.03□□□□□ -0.32
VMP1-206ENST00000587945 FAM221AA4D161 298 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 CCDC151A5D8V7 595 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 A6NNC1 897 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
VMP1-206ENST00000587945 PLOD3O60568 738 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 ABCB7O75027 752 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 SHBGP04278 402 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 JUNP05412 331 aaKnown RBP13.02□□□□□ -0.33
VMP1-206ENST00000587945 TMIGD3P0DMS9 266 aaPredicted RBP13.02□□□□□ -0.33
VMP1-206ENST00000587945 DDCP20711 480 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 MPIP34949 423 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 OPRM1P35372 400 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 KRT20P35900 424 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 MC3RP41968 323 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 NCBP2P52298 156 aaKnown RBP eCLIP13.02□□□□□ -0.339e-8■□□□□ 10.2
VMP1-206ENST00000587945 GAS1P54826 345 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 GFRA1P56159 465 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.33
VMP1-206ENST00000587945 EFR3AQ14156 821 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 IMPG1Q17R60 797 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 SH2D4BQ5SQS7 431 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 FAM71E1Q6IPT2 247 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 SH2D5Q6ZV89 423 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 IFNEQ86WN2 208 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 SFXN2Q96NB2 322 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 SIRT5Q9NXA8 310 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 FLRT3Q9NZU0 649 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 ST6GALNAC2Q9UJ37 374 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms