RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 RPL38P63173 70 aaKnown RBP16.17■□□□□ 0.18
TPM4-206ENST00000587201 SNTA1Q13424 505 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 ARL13AQ5H913 290 aaPredicted RBP16.17■□□□□ 0.18
TPM4-206ENST00000587201 NPSR1Q6W5P4 371 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 RNF165Q6ZSG1 346 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 ZCCHC23Q6ZST2 131 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 GDF7Q7Z4P5 450 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
TPM4-206ENST00000587201 DDIASQ8IXT1 998 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 CLYBLQ8N0X4 340 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 LILRB4Q8NHJ6 448 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 TWIST2Q8WVJ9 160 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 ADOQ96SZ5 270 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 PARD6BQ9BYG5 372 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 UCK2Q9BZX2 261 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 GALNT9Q9HCQ5 603 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 OR10H1Q9Y4A9 318 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 TRAF6Q9Y4K3 522 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 PCDHGB3Q9Y5G1 929 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 CACNA1CQ13936 2221 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 EXPH5Q8NEV8 1989 aa16.17■□□□□ 0.18
TPM4-206ENST00000587201 TEX15Q9BXT5 2789 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 A0A087WV62 115 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 TMEM233B4DJY2 109 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 TSPAN2O60636 221 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 ABCB7O75027 752 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 FGF4P08620 206 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 CREB1P16220 341 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 ZFP36L2P47974 494 aaKnown RBP16.16■□□□□ 0.18
TPM4-206ENST00000587201 PSPHP78330 225 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 EFR3AQ14156 821 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 GALNTL6Q49A17 601 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 EIPR1Q53HC9 387 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 WIPI1Q5MNZ9 446 aaPredicted RBP16.16■□□□□ 0.18
TPM4-206ENST00000587201 SH2D4BQ5SQS7 431 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 LARP4Q71RC2 724 aaKnown RBP eCLIP16.16■□□□□ 0.18
TPM4-206ENST00000587201 ULK2Q8IYT8 1036 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 MREGQ8N565 214 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 AGR3Q8TD06 166 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 NTNG2Q96CW9 530 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 SLC35A4Q96G79 324 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 AMDHD1Q96NU7 426 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 TMEM109Q9BVC6 243 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 KCNJ16Q9NPI9 418 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 DDX18Q9NVP1 670 aaKnown RBP16.16■□□□□ 0.18
TPM4-206ENST00000587201 C19orf53Q9UNZ5 99 aaPredicted RBP16.16■□□□□ 0.18
TPM4-206ENST00000587201 MAPRE3Q9UPY8 281 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 SLC6A5Q9Y345 797 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 PHF3Q92576 2039 aaKnown RBP16.16■□□□□ 0.18
TPM4-206ENST00000587201 ITPR2Q14571 2701 aa16.16■□□□□ 0.18
TPM4-206ENST00000587201 A0A0G2JNJ9 132 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 PLOD2O00469 737 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 PIP5K1BO14986 540 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 LSM1O15116 133 aaKnown RBP16.15■□□□□ 0.18
TPM4-206ENST00000587201 PDPK1O15530 556 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 AKAP10O43572 662 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 SDC1P18827 310 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 CRYZQ08257 329 aaKnown RBP16.15■□□□□ 0.18
TPM4-206ENST00000587201 KRT71Q3SY84 523 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 RFTN2Q52LD8 501 aaPredicted RBP16.15■□□□□ 0.18
TPM4-206ENST00000587201 ANKRD26P1Q6NSI1 321 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 MEX3BQ6ZN04 569 aaKnown RBP16.15■□□□□ 0.18
TPM4-206ENST00000587201 FAM83FQ8NEG4 500 aaPredicted RBP16.15■□□□□ 0.18
TPM4-206ENST00000587201 OR4N2Q8NGD1 307 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 EFHD2Q96C19 240 aaPredicted RBP16.15■□□□□ 0.18
TPM4-206ENST00000587201 FCRL1Q96LA6 429 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 TSSK3Q96PN8 268 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 TIMP4Q99727 224 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 CCT7Q99832 543 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 SPOCK3Q9BQ16 436 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 ENKD1Q9H0I2 346 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 Q9UFV3 132 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 TMED5Q9Y3A6 229 aa16.15■□□□□ 0.18
TPM4-206ENST00000587201 AHRRA9YTQ3 701 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 FAM47E-STBD1D6RA91 191 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 UPK1AO00322 258 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 RGS16O15492 202 aaPredicted RBP16.14■□□□□ 0.17
TPM4-206ENST00000587201 TYROBPO43914 113 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 CBR3O75828 277 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 SERPINB5P36952 375 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 ADH7P40394 386 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 PNLIPRP2P54317 469 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 MRPS22P82650 360 aaKnown RBP16.14■□□□□ 0.17
TPM4-206ENST00000587201 PSG6Q00889 435 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 HSPB3Q12988 150 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 UGT3A2Q3SY77 523 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 YRDCQ86U90 279 aaKnown RBP16.14■□□□□ 0.17
TPM4-206ENST00000587201 PM20D2Q8IYS1 436 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 OR2L13Q8N349 312 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 CLHC1Q8NHS4 586 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 PPCDCQ96CD2 204 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 ELP4Q96EB1 424 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 TRIM8Q9BZR9 551 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 REEP4Q9H6H4 257 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 SERHLQ9NQF3 203 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 SH3BP4Q9P0V3 963 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 BAIAP2L1Q9UHR4 511 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 CAMK2AQ9UQM7 478 aa16.14■□□□□ 0.17
TPM4-206ENST00000587201 CTIFO43310 598 aaKnown RBP16.13■□□□□ 0.17
TPM4-206ENST00000587201 TOXO94900 526 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms