RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 HLA-DQA1Q5Y7H0 255 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 NSUN5P2Q63ZY6 315 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 MED27Q6P2C8 311 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 RNF111Q6ZNA4 994 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 GPRIN3Q6ZVF9 776 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 SEM1Q6ZVN7 128 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 VN1R5Q7Z5H4 357 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 PACS2Q86VP3 889 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 C9orf40Q8IXQ3 194 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 ST13P4Q8IZP2 240 aaPredicted RBP9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 TEX9Q8N6V9 391 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 L3MBTL4Q8NA19 623 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 TNIP2Q8NFZ5 429 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 DIO2Q92813 273 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 ESAMQ96AP7 390 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 GAL3ST4Q96RP7 486 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 EBF4Q9BQW3 602 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 MS4A8Q9BY19 250 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 WDR41Q9HAD4 459 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 MRGBPQ9NV56 204 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 PHF11Q9UIL8 331 aa9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 CHCHD2Q9Y6H1 151 aaPredicted RBP9.84□□□□□ -0.83
CSNK1D-226ENST00000585026 LRRC3CA6NJW4 275 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CD8B2A6NJW9 211 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CLCA1A8K7I4 914 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 EEF1E1-BLOC1S5C9J1V9 151 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CASKO14936 926 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 EEF1E1O43324 174 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CCNT2O60583 730 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 IL18BPO95998 194 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TGFB1P01137 390 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 PCNAP12004 261 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TSPAN8P19075 237 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 NRG3P56975 720 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 DCAF7P61962 342 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 BTKQ06187 659 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CRYZQ08257 329 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TRAF3Q13114 568 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 SLAMF1Q13291 335 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 NTRK2Q16620 822 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 SLC9B1Q4ZJI4 515 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 FBXO48Q5FWF7 155 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 KHDRBS2Q5VWX1 349 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 LIPJQ5W064 366 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 OR4C11Q6IEV9 310 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 SCIMPQ6UWF3 145 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 LYPD8Q6UX82 237 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CLEC9AQ6UXN8 241 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 ZNF793Q6ZN11 406 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 LARP4Q71RC2 724 aaKnown RBP eCLIP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 ZNF771Q7L3S4 317 aaPredicted RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 MILR1Q7Z6M3 343 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 MTDHQ86UE4 582 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 GPR180Q86V85 440 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 OR4N5Q8IXE1 308 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 WFDC11Q8NEX6 87 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 OR10G3Q8NGC4 313 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 OR52B6Q8NGF0 335 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CEP70Q8NHQ1 597 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 RGMAQ96B86 450 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 PPWD1Q96BP3 646 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 SECISBP2Q96T21 854 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TIMP4Q99727 224 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 SHCBP1LQ9BZQ2 653 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 WWTR1Q9GZV5 400 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 PRDM14Q9GZV8 571 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CALHM2Q9HA72 323 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TCF7L2Q9NQB0 619 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 SAR1AQ9NR31 198 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TRPS1Q9UHF7 1281 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CNOT11Q9UKZ1 510 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 TRIM33Q9UPN9 1127 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 CAMK2AQ9UQM7 478 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 ANGPTL3Q9Y5C1 460 aa9.83□□□□□ -0.84
CSNK1D-226ENST00000585026 C2orf92A0A1B0GVN3 265 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 TMEM233B4DJY2 109 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 RTCAO00442 366 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 SDHDO14521 159 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 SLC22A2O15244 555 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 TRIM3O75382 744 aaPredicted RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 ERN1O75460 977 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 CLDN9O95484 217 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 GPR75O95800 540 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 CHEK2O96017 543 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 JUNP05412 331 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 CD22P20273 847 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 HOXC12P31275 282 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 GALNSP34059 522 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 CDK9P50750 372 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 CCNG1P51959 295 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 ZNF136P52737 540 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 ARFIP1P53367 373 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 FOXA1P55317 472 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 ERVK-8P63133 956 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 EEF1A1P68104 462 aaKnown RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 NKX6-1P78426 367 aaPredicted RBP9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 PHEXP78562 749 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 TNFRSF17Q02223 184 aa9.82□□□□□ -0.84
CSNK1D-226ENST00000585026 SF3A3Q12874 501 aaKnown RBP eCLIP9.82□□□□□ -0.844e-13■■■■□ 21.5
CSNK1D-226ENST00000585026 ZNF267Q14586 743 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms