RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 C10orf82Q8WW14 230 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 SPACA9Q96E40 222 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-215ENST00000584944 SLC35G5Q96KT7 338 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 SGCZQ96LD1 299 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 BTBD9Q96Q07 612 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 YIPF4Q9BSR8 244 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 NXF5Q9H1B4 397 aaKnown RBP12.81□□□□□ -0.36
TRAF4-215ENST00000584944 CXorf36Q9H7Y0 433 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 ZBTB20Q9HC78 741 aaPredicted RBP12.81□□□□□ -0.36
TRAF4-215ENST00000584944 KLHL1Q9NR64 748 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 NDUFAF1Q9Y375 327 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 NPFFR2Q9Y5X5 522 aa12.81□□□□□ -0.36
TRAF4-215ENST00000584944 TMEM247A6NEH6 219 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 DCTN3O75935 186 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 OR6B1O95007 311 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 AGR2O95994 175 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 PDGFAP04085 211 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 CLPSP04118 112 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 HMGN2P05204 90 aaKnown RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 ATP6V1C1P21283 382 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 TRHRP34981 398 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 TRPC1P48995 793 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 CLK3P49761 638 aaKnown RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 KHKP50053 298 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 TNFSF10P50591 281 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 CORO7P57737 925 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 HPCAP84074 193 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 CYP27C1Q4G0S4 372 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 ZNF766Q5HY98 468 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 SPINK14Q6IE38 97 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 IGFL2Q6UWQ7 119 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 C6orf120Q7Z4R8 191 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 PRR22Q8IZ63 422 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 SLC34A3Q8N130 599 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 ARMC10Q8N2F6 343 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 SIMC1Q8NDZ2 872 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 PSMA8Q8TAA3 256 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 PNPLA2Q96AD5 504 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 TMCO6Q96DC7 493 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 VSTM2LQ96N03 204 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 RAD21L1Q9H4I0 556 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 EXD2Q9NVH0 621 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 LEF1Q9UJU2 399 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 DTX4Q9Y2E6 619 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 GPR55Q9Y2T6 319 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 ARL2BPQ9Y2Y0 163 aa12.8□□□□□ -0.36
TRAF4-215ENST00000584944 KLF13Q9Y2Y9 288 aaPredicted RBP12.8□□□□□ -0.36
TRAF4-215ENST00000584944 USP9YO00507 2555 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 NBPF19A0A087WUL8 3843 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 A0A1W2PP18 115 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 KLRC4-KLRK1H3BQV0 150 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 K7EM74 188 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SLC22A2O15244 555 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SNX3O60493 162 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 ABCB7O75027 752 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 GSNP06396 782 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 HPGDP15428 266 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 NAGAP17050 411 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 ABCD3P28288 659 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 ADSLP30566 484 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 WNT3P56703 355 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 STX5Q13190 355 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 EFR3AQ14156 821 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 NADK2Q4G0N4 442 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SLC22A10Q63ZE4 541 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SLC6A19Q695T7 634 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SLC25A25Q6KCM7 469 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 GK5Q6ZS86 529 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 WDR53Q7Z5U6 358 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 MTDHQ86UE4 582 aaKnown RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 CATSPER1Q8NEC5 780 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 DNAJB8Q8NHS0 232 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 TMBIM1Q969X1 311 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 ADIPOR1Q96A54 375 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 OMA1Q96E52 524 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 RMND5BQ96G75 393 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 COL21A1Q96P44 957 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 NPAS2Q99743 824 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 INPP5KQ9BT40 448 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 G6PC3Q9BUM1 346 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 METTL7AQ9H8H3 244 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 CACYBPQ9HB71 228 aaKnown RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SAR1AQ9NR31 198 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SIRT3Q9NTG7 399 aaPredicted RBP12.79□□□□□ -0.36
TRAF4-215ENST00000584944 SACM1LQ9NTJ5 587 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 FAM53CQ9NYF3 392 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 LUZP4Q9P127 313 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 CBLCQ9ULV8 474 aa12.79□□□□□ -0.36
TRAF4-215ENST00000584944 USP9XQ93008 2570 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 RP1L1Q8IWN7 2480 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 TMEM200CA6NKL6 621 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 NDUFAB1O14561 156 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms