RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	P4HA3	Q7Z4N8	544 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	GRAMD2A	Q8IUY3	354 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	CDYL2	Q8N8U2	506 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR9A2	Q8NGT5	310 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	CTHRC1	Q96CG8	243 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZFP3	Q96NJ6	502 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	MRPL57	Q9BQC6	102 aa	Known RBP	13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	G6PC3	Q9BUM1	346 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	BRF2	Q9HAW0	419 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	CLCF1	Q9UBD9	225 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF225	Q9UK10	706 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	WIF1	Q9Y5W5	379 aa		13.74	□□□□□ -0.21
SREBF1-222	ENST00000583732	MAP1A	P78559	2803 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR6C70	A6NIJ9	312 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	MANBA	O00462	879 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	T	O15178	435 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	PCDH7	O60245	1069 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	SBK3	P0C264	359 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	SRD5A2	P31213	254 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	KRT20	P35900	424 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	NPSR1	Q6W5P4	371 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	UBQLNL	Q8IYU4	475 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	WNT2B	Q93097	391 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	EFHD2	Q96C19	240 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	DACH2	Q96NX9	599 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	EBPL	Q9BY08	206 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	FOLH1B	Q9HBA9	442 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	NEUROD4	Q9HD90	331 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	NMRK1	Q9NWW6	199 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	VPS29	Q9UBQ0	182 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	DLGAP4	Q9Y2H0	992 aa		13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	GPR55	Q9Y2T6	319 aa	Predicted RBP	13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SREBF1-222	ENST00000583732	GNG14	A0A1W2PPG7	69 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	CASK	O14936	926 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	SCO2	O43819	266 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	3e-7	■■□□□ 14
SREBF1-222	ENST00000583732	SUPT7L	O94864	414 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	TGM6	O95932	706 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	COL6A2	P12110	1019 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	FOSL1	P15407	271 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	CD53	P19397	219 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	GRK2	P25098	689 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	HMOX2	P30519	316 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	HTR6	P50406	440 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	DIO3	P55073	304 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	CLDN18	P56856	261 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	TRA2B	P62995	288 aa	Known RBP	13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	CLC	Q05315	142 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF155	Q12901	538 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	ERCC6L	Q2NKX8	1250 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	AAGAB	Q6PD74	315 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	ADGRE4P	Q86SQ3	457 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	CNEP1R1	Q8N9A8	125 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR4K17	Q8NGC6	315 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR4N2	Q8NGD1	307 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	CDC26	Q8NHZ8	85 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	ZNF675	Q8TD23	568 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	DCAKD	Q8WVC6	231 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	IFT81	Q8WYA0	676 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	SLC35A4	Q96G79	324 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	BTBD9	Q96Q07	612 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	FUT8	Q9BYC5	575 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	ACBD3	Q9H3P7	528 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	SENP1	Q9P0U3	644 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	MCM8	Q9UJA3	840 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	PACSIN3	Q9UKS6	424 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	ACAN	P16112	2415 aa		13.72	□□□□□ -0.21
SREBF1-222	ENST00000583732	FLNA	P21333	2647 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732		A0A1W2PNV4	684 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732		B4DXG7	233 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	TSPAN2	O60636	221 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	ABCB7	O75027	752 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	GOSR1	O95249	250 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	KRT6A	P02538	564 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	KRT6B	P04259	564 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	CT45A8	P0DMV1	189 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	CT45A9	P0DMV2	189 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	DPP4	P27487	766 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	ADSL	P30566	484 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	HSD17B3	P37058	310 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	KRT6C	P48668	564 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	SIRPA	P78324	504 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	RAE1	P78406	368 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	NKX6-1	P78426	367 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	BTK	Q06187	659 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	LTB	Q06643	244 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	CSTF3	Q12996	717 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	STX5	Q13190	355 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	EFR3A	Q14156	821 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	RASA2	Q15283	850 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	UNC50	Q53HI1	259 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	CT45A2	Q5DJT8	189 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	SH2D4B	Q5SQS7	431 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	KRTAP1-3	Q8IUG1	177 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	MTBP	Q96DY7	904 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	APIP	Q96GX9	242 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms