RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 SCAMP1O15126 338 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PSMD3O43242 534 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 DCXO43602 365 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PDE5AO76074 875 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TPPPO94811 219 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 H6PDO95479 791 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 FYNP06241 537 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 C2P06681 752 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SRPRAP08240 638 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MMP10P09238 476 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MCF2P10911 925 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PSMC3P17980 439 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ERCC2P18074 760 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 XRCC1P18887 633 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CYP3A5P20815 502 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CYP2F1P24903 491 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SDC4P31431 198 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SERPINB5P36952 375 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 GRIA1P42261 906 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 HCAR3P49019 387 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ACADVLP49748 655 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 NPY4RP50391 375 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC26A2P50443 739 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 LIMK2P53671 638 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 BACE1P56817 501 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 DNAJB13P59910 316 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TFAMQ00059 246 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CDKL1Q00532 357 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 YWHAHQ04917 246 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PRKAA1Q13131 559 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 STX5Q13190 355 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CEACAM7Q14002 265 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CA9Q16790 459 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 LRRC36Q1X8D7 754 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 C2orf76Q3KRA6 126 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 HSDL1Q3SXM5 330 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ZBED5Q49AG3 693 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 KCTD21Q4G0X4 260 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RAB6CQ53S08 254 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 IGSF11Q5DX21 431 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ADAMTSL4-AS1Q5T5F5 129 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ATF7IP2Q5U623 682 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 NSUN5P2Q63ZY6 315 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 KCTD11Q693B1 232 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RWDD4Q6NW29 188 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ZYG11AQ6WRX3 759 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 FAM183BPQ6ZVS7 135 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ZNF554Q86TJ5 538 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 UNC93AQ86WB7 457 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CARM1Q86X55 608 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PM20D2Q8IYS1 436 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 LSMEM2Q8N112 164 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CRYBG2Q8N1P7 616 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 DCLK2Q8N568 766 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PACRGLQ8N7B6 248 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ZNF781Q8N8C0 355 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ANKFN1Q8N957 763 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TSPAN14Q8NG11 270 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 UBA3Q8TBC4 463 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 URGCPQ8TCY9 931 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MAPK15Q8TD08 544 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 NT5C3BQ969T7 300 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TMCO6Q96DC7 493 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MOCOSQ96EN8 888 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SGF29Q96ES7 293 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ELMOD3Q96FG2 381 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CERS2Q96G23 380 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 C18orf12Q96KH6 178 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 HSFY1Q96LI6 401 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 OR52B2Q96RD2 323 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RANBP9Q96S59 729 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 GAD1Q99259 594 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 DOK1Q99704 481 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PKP2Q99959 881 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 NAA11Q9BSU3 229 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SNRNP25Q9BV90 132 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 C1QTNF1Q9BXJ1 281 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TDRD1Q9BXT4 1180 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TMEM39BQ9GZU3 492 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RAB6CQ9H0N0 254 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SNX25Q9H3E2 840 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 HRH4Q9H3N8 390 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PIGMQ9H3S5 423 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 PLK3Q9H4B4 646 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RPAP3Q9H6T3 665 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 SMYD3Q9H7B4 428 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 LRRC40Q9H9A6 602 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 NMRAL1Q9HBL8 299 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 C8orf4Q9NR00 106 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 OLAHQ9NV23 265 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ARMC1Q9NVT9 282 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 ARHGEF38Q9NXL2 777 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 EPS15L1Q9UBC2 864 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 DNAJB9Q9UBS3 223 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 MARCOQ9UEW3 520 aaPredicted RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CD300AQ9UGN4 299 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RSL24D1Q9UHA3 163 aaKnown RBP3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 CDH7Q9ULB5 785 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 RNF11Q9Y3C5 154 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms