RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NCLNQ969V3 563 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 EXOSC8Q96B26 276 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 PPWD1Q96BP3 646 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 REXO5Q96IC2 774 aaKnown RBP12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 BBS4Q96RK4 519 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 CPPED1Q9BRF8 314 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 LHPPQ9H008 270 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 PCDHAC1Q9H158 963 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 NEUROD4Q9HD90 331 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 SLC35C2Q9NQQ7 365 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 ARMC1Q9NVT9 282 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 VAPAQ9P0L0 249 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 COPS7AQ9UBW8 275 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 PCSK5Q92824 1860 aa12.55□□□□□ -0.4
CSNK1D-220ENST00000581737 DOCK10Q96BY6 2186 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 TRBV5-3A0A0A0MS03 114 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 A8MUA0 341 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 C17orf105B2RV13 164 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 MKRN2OSH3BPM6 223 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 SORBS2O94875 1100 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 CPSF4O95639 269 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 KRT75O95678 551 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 PDGFAP04085 211 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 ALPPP05187 535 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 GGT1P19440 569 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 ITGA3P26006 1051 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 ANXA11P50995 505 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 CHAF1BQ13112 559 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 GRAMD1BQ3KR37 738 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 GLYATQ6IB77 296 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 CYP2R1Q6VVX0 501 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 ZNF621Q6ZSS3 439 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 SERPINA11Q86U17 422 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 SLC30A8Q8IWU4 369 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 EID3Q8N140 333 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 ICA1LQ8NDH6 482 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 OR4A15Q8NGL6 344 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 RIT1Q92963 219 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 FAM162AQ96A26 154 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 VMP1Q96GC9 406 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 FBXL20Q96IG2 436 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 EGLN2Q96KS0 407 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 RNF145Q96MT1 663 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 MMP25Q9NPA2 562 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 CCM2LQ9NUG4 571 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 C5AR2Q9P296 337 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 EGFL7Q9UHF1 273 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 PPIEQ9UNP9 301 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 DTNAQ9Y4J8 743 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 PCDHB14Q9Y5E9 798 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 GMEB1Q9Y692 573 aa12.54□□□□□ -0.4
CSNK1D-220ENST00000581737 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 GABRR3A8MPY1 467 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 H3BNX3 289 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 CLIC1O00299 241 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 PDPK1O15530 556 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 SEMA7AO75326 666 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 CEACAM4O75871 244 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 SLITRK5O94991 958 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 ATP1B1P05026 303 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 ATP6V1B2P21281 511 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 NT5EP21589 574 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 GNLYP22749 145 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 FASP25445 335 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 MPIP34949 423 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 MSX2P35548 267 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 FEN1P39748 380 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 ERFP50548 548 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 CCL11P51671 97 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 CHRNB3Q05901 458 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 KLRB1Q12918 225 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 FADDQ13158 208 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 MYBPC3Q14896 1274 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 GALNT12Q8IXK2 581 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 OR10A6Q8NH74 314 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 PTPMT1Q8WUK0 201 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 UCN3Q969E3 161 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 CNRIP1Q96F85 164 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 ZBED6CLQ96FA7 236 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 THOC3Q96J01 351 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 ZNF681Q96N22 645 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 KAT8Q9H7Z6 458 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 SERHLQ9NQF3 203 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 GPR83Q9NYM4 423 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 TEKT2Q9UIF3 430 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 RPS6KA6Q9UK32 745 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 AURKCQ9UQB9 309 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 PCDHGA9Q9Y5G4 932 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 CELSR2Q9HCU4 2923 aa12.53□□□□□ -0.4
CSNK1D-220ENST00000581737 WASHC1A8K0Z3 465 aa12.52□□□□□ -0.41
CSNK1D-220ENST00000581737 CXCR6O00574 342 aa12.52□□□□□ -0.41
CSNK1D-220ENST00000581737 LAMP1P11279 417 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms