RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GSTA1P08263 222 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 EFNA3P52797 238 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 PUDPQ08623 228 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 PSG7Q13046 419 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 IL18R1Q13478 541 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 PDE7AQ13946 482 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 EIF2B1Q14232 305 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 KYAT1Q16773 422 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 LGSNQ5TDP6 509 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 CWC27Q6UX04 472 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 TMCO5AQ8N6Q1 288 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 NKAIN3Q8N8D7 197 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 ST7LQ8TDW4 575 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 RNF138Q8WVD3 245 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 ELSPBP1Q96BH3 223 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 C5orf30Q96GV9 206 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 DHTKD1Q96HY7 919 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF184Q99676 751 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 FAM213AQ9BRX8 229 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 DESI2Q9BSY9 194 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 DPH7Q9BTV6 452 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 TM2D1Q9BX74 207 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 ALG9Q9H6U8 611 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 PIGVQ9NUD9 493 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 PDE10AQ9Y233 779 aa2.11□□□□□ -2.07
SMCHD1-206ENST00000581631 A0A1W2PRQ8 180 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 PINLYPA6NC86 204 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 LRIT2A6NDA9 550 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 CCDC69A6NI79 296 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 PDLIM1O00151 329 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 PDXKO00764 312 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 IGSF6O95976 241 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 H2AFZP0C0S5 128 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF17P17021 662 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 MDKP21741 143 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 UGT1A3P35503 534 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 KIAA1024LP59773 190 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 GALK2Q01415 458 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 SMU1Q2TAY7 513 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 SBK1Q52WX2 424 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 CMPK2Q5EBM0 449 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 PRAMEF7Q5VXH5 474 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 MEDAGQ5VYS4 303 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 OTPQ5XKR4 325 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 TFAP2EQ6VUC0 442 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 DPY19L2P2Q6ZN68 376 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 ERI1Q8IV48 349 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 C9orf40Q8IXQ3 194 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 CHCHD4Q8N4Q1 142 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 MLKLQ8NB16 471 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 TMEM37Q8WXS4 190 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 DLX4Q92988 240 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 TRPV6Q9H1D0 765 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 MEPEQ9NQ76 525 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 EXOSC3Q9NQT5 275 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 STARD5Q9NSY2 213 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 NDUFA13Q9P0J0 144 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 COPS7AQ9UBW8 275 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 MIOXQ9UGB7 285 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 PURGQ9UJV8 347 aaKnown RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 BARX2Q9UMQ3 279 aaPredicted RBP2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 NPC1L1Q9UHC9 1359 aa2.1□□□□□ -2.07
SMCHD1-206ENST00000581631 PTPRUQ92729 1446 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 A0A1W2PRV1 198 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 ARPC1BO15143 372 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 LATO43561 262 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 SYNGR4O95473 234 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 APRTP07741 180 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 NR2C1P13056 603 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 AREGP15514 252 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 SDC1P18827 310 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 FUT3P21217 361 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 MUTP22033 750 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 ATP5DP30049 168 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 SGSHP51688 502 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 NOP14P78316 857 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 CCZ1BP86790 482 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 CCZ1P86791 482 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 HERPUD1Q15011 391 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF674Q2M3X9 581 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 ZNF658BQ4V348 819 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 SPATA46Q5T0L3 261 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 UFSP1Q6NVU6 142 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 RANBP3LQ86VV4 465 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 CCDC170Q8IYT3 715 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 ENTHD1Q8IYW4 607 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 SFRP1Q8N474 314 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 RNF175Q8N4F7 328 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 MARC2Q969Z3 335 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 TMEM45BQ96B21 275 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 CARD9Q9H257 536 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 Q9H3A6 140 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 HPS4Q9NQG7 708 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 NEU3Q9UQ49 428 aa2.09□□□□□ -2.07
SMCHD1-206ENST00000581631 MEGF6O75095 1541 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 TRBV7-9A0A0J9YWB2 115 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 H3BMH7 237 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 WWP2O00308 870 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 OR7A17O14581 309 aa2.08□□□□□ -2.08
SMCHD1-206ENST00000581631 LRP3O75074 770 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms