RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 ZNF669Q96BR6 464 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 CCDC42Q96M95 316 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 DSN1Q9H410 356 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 UNKLQ9H9P5 680 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 LPAR2Q9HBW0 351 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 FANCFQ9NPI8 374 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 SNX8Q9Y5X2 465 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 PTGDR2Q9Y5Y4 395 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 OR2M5A3KFT3 312 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 EIF1AYO14602 144 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 CLGNO14967 610 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 LYZL6O75951 148 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 FCGR2AP12318 317 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 AGTR1P30556 359 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 NPY2RP49146 381 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 ARFIP2P53365 341 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 TNFRSF17Q02223 184 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 SRSF4Q08170 494 aaKnown RBP12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 STX5Q13190 355 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 SNX1Q13596 522 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 ADCY4Q8NFM4 1077 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 TTLQ8NG68 377 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 VPS39Q96JC1 886 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 POTEKPQ9BYX7 375 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 CXorf21Q9HAI6 301 aa12.42□□□□□ -0.42
CSNK1D-213ENST00000580446 TCRBV7S3A2A0A539 114 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 SCO2O43819 266 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 ZNF189O75820 626 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 GPR75O95800 540 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 CD22P20273 847 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 EPHA1P21709 976 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 DEKP35659 375 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 ZNF83P51522 516 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 HADHBP55084 474 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 CDH15P55291 814 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 AP1S2P56377 157 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 BASP1P80723 227 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 TGM3Q08188 693 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 KLF1Q13351 362 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 SNTA1Q13424 505 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 DHX34Q14147 1143 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 EXOSC7Q15024 291 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 PPA1Q15181 289 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 TRIP10Q15642 601 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 AP5B1Q2VPB7 878 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 SHQ1Q6PI26 577 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 BHLHA15Q7RTS1 189 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 GGNQ86UU5 652 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 GALNT12Q8IXK2 581 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 KRT78Q8N1N4 520 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 METTL25Q8N6Q8 603 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 ZDHHC22Q8N966 263 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 TMBIM1Q969X1 311 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 DUX5Q96PT3 197 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 SLC6A7Q99884 636 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 TRIM54Q9BYV2 358 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.41□□□□□ -0.428e-7■■■■□ 19.3
CSNK1D-213ENST00000580446 MED11Q9P086 117 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 COMMD10Q9Y6G5 202 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 EXPH5Q8NEV8 1989 aa12.41□□□□□ -0.42
CSNK1D-213ENST00000580446 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 A0A1W2PR80 420 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 NPEPPSL1A6NEC2 478 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 NDUFS8O00217 210 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 SLU7O95391 586 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 TGFB1P01137 390 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 GNAZP19086 355 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 IL11P20809 199 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 UBASH3AP57075 661 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 RPS3AP61247 264 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 LRRC8EQ6NSJ5 796 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 TMEM81Q6P7N7 255 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 Q6ZSR9 355 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 GPR180Q86V85 440 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 TANKQ92844 425 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 ZBTB8AQ96BR9 441 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 FBXO17Q96EF6 278 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 DNAJC7Q99615 494 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 EGFL8Q99944 293 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 TBCDQ9BTW9 1192 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 TRMOQ9BU70 441 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 MS4A8Q9BY19 250 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 OR51B5Q9H339 312 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 MED29Q9NX70 200 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 PPIAL4AQ9Y536 164 aa12.4□□□□□ -0.42
CSNK1D-213ENST00000580446 GOLGA6L10A0A0M3HER8 536 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 SMTNL1A8MU46 457 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 LIASO43766 372 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 CXCL13O43927 109 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 REM1O75628 298 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 PRB2P02812 416 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 LIMS1P48059 325 aa12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 DSCR4P56555 118 aaPredicted RBP12.39□□□□□ -0.43
CSNK1D-213ENST00000580446 POU4F1Q01851 419 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms