RNA–Protein interactions for RNA: ENST00000577875.5

KPNB1-204, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-204ENST00000577875 KLC1Q07866 573 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 SF3A3Q12874 501 aaKnown RBP eCLIP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CUL1Q13616 776 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 SNTB1Q13884 538 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 E2F2Q14209 437 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 FASTKQ14296 549 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CSHL1Q14406 222 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 KRT33BQ14525 404 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ETFDHQ16134 617 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 MEP1AQ16819 746 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 KBTBD12Q3ZCT8 623 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TCTE1Q5JU00 501 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 HECTD2Q5U5R9 776 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ATG16L1Q676U5 607 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ZNF449Q6P9G9 518 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 SPESP1Q6UW49 350 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 SHISA6Q6ZSJ9 500 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TTLL10Q6ZVT0 673 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 PIWIL4Q7Z3Z4 852 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TAX1BP1Q86VP1 789 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 AMIGO1Q86WK6 493 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CCDC25Q86WR0 208 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 IFT20Q8IY31 132 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 LRRC56Q8IYG6 542 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CPNE9Q8IYJ1 553 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TBC1D21Q8IYX1 336 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 BEST3Q8N1M1 668 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 RPRMLQ8N4K4 120 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 C2orf73Q8N5S3 287 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 LINC01356Q8N9X3 169 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TTC29Q8NA56 475 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 OR56A1Q8NGH5 318 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 MBD3L2Q8NHZ7 208 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ZNF483Q8TF39 744 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ANKRD49Q8WVL7 239 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 LCN9Q8WX39 176 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TMEM125Q96AQ2 219 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 DACT3Q96B18 629 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 PDLIM5Q96HC4 596 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 IL17FQ96PD4 163 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 OR2A14Q96R47 310 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 NEU1Q99519 415 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 PKP4Q99569 1192 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 HGH1Q9BTY7 390 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CENPOQ9BU64 300 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TSSK1BQ9BXA7 367 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 FUT8Q9BYC5 575 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 HES7Q9BYE0 225 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ATG10Q9H0Y0 220 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CDC42EP4Q9H3Q1 356 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 ANKZF1Q9H8Y5 726 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CAB39LQ9H9S4 337 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 FAM60AQ9NP50 221 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 CUTCQ9NTM9 273 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 C14orf105Q9NVL8 296 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 POLG2Q9UHN1 485 aa4.24□□□□□ -1.73
KPNB1-204ENST00000577875 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 TDRKHQ9Y2W6 561 aaKnown RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 KLF13Q9Y2Y9 288 aaPredicted RBP4.24□□□□□ -1.73
KPNB1-204ENST00000577875 RAI1Q7Z5J4 1906 aaPredicted RBP4.23□□□□□ -1.73
KPNB1-204ENST00000577875 IGLV3-12A0A075B6K2 115 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 A0A0J9YY10 115 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 A0A1W2PPH5 198 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 HSPB2A8KAH6 182 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 E5RI56 91 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 KLRC4-KLRK1H3BQV0 150 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 PRPF4O43172 522 aaKnown RBP eCLIP4.23□□□□□ -1.73
KPNB1-204ENST00000577875 VPS26AO75436 327 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 GPANK1O95872 356 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 STATHP02808 62 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 CELA2AP08217 269 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 CHRM5P08912 532 aaPredicted RBP4.23□□□□□ -1.73
KPNB1-204ENST00000577875 MPC1LP0DKB6 136 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 ERGP11308 486 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 PAX1P15863 534 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 SAT1P21673 171 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 GCAP28676 217 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 PKLRP30613 574 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 APOBEC3AP31941 199 aaPredicted RBP4.23□□□□□ -1.73
KPNB1-204ENST00000577875 SHMT2P34897 504 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 MSX2P35548 267 aaPredicted RBP4.23□□□□□ -1.73
KPNB1-204ENST00000577875 BDKRB1P46663 353 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 EMP2P54851 167 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 SLURP1P55000 103 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 TAS2R50P59544 299 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 OC90Q02509 493 aaPredicted RBP4.23□□□□□ -1.73
KPNB1-204ENST00000577875 DLG1Q12959 904 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 CCNIQ14094 377 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 EFTUD2Q15029 972 aaKnown RBP eCLIP4.23□□□□□ -1.732e-6■■■■□ 20.8
KPNB1-204ENST00000577875 TMED2Q15363 201 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 ZIC1Q15915 447 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 HSPB2Q16082 182 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 PHKG1Q16816 387 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 SYTL3Q4VX76 610 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 DEPDC1Q5TB30 811 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 GRTP1Q5TC63 336 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 H3F3CQ6NXT2 135 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 PRMT9Q6P2P2 845 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 FBXO42Q6P3S6 717 aa4.23□□□□□ -1.73
KPNB1-204ENST00000577875 TRIM73Q86UV7 250 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms