RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 RPL9P32969 192 aaKnown RBP4.06□□□□□ -1.76
NUP88-213ENST00000576862 OR1D2P34982 312 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 HSD17B2P37059 387 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 MAGEB1P43366 347 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 NT5C2P49902 561 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 ARF5P84085 180 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 BEX3Q00994 111 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 ARHGAP1Q07960 439 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 CCDC173Q0VFZ6 552 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 RPA4Q13156 261 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 CUL2Q13617 745 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 CCL14Q16627 93 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 IMMTQ16891 758 aaKnown RBP4.06□□□□□ -1.76
NUP88-213ENST00000576862 MUC21Q5SSG8 566 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 C12orf60Q5U649 245 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 AP1ARQ63HQ0 302 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 TMEM64Q6YI46 380 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 SPATA24Q86W54 205 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 TBC1D10CQ8IV04 446 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 BANPQ8N9N5 519 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 CNNM3Q8NE01 707 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 OR7G3Q8NG95 312 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 OR56B2PQ8NGI1 322 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 TYMSOSQ8TAI1 123 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 FIBINQ8TAL6 211 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 RNF139Q8WU17 664 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 UBLCP1Q8WVY7 318 aaPredicted RBP4.06□□□□□ -1.76
NUP88-213ENST00000576862 ACPTQ9BZG2 426 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 KRT23Q9C075 422 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 HSD3B7Q9H2F3 369 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 ZNF665Q9H7R5 613 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 VCPKMTQ9H867 229 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 FANCEQ9HB96 536 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 CRLF2Q9HC73 371 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 S100A14Q9HCY8 104 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 ANO10Q9NW15 660 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 AKAP7Q9P0M2 348 aaPredicted RBP4.06□□□□□ -1.76
NUP88-213ENST00000576862 BARX2Q9UMQ3 279 aaPredicted RBP4.06□□□□□ -1.76
NUP88-213ENST00000576862 AURKCQ9UQB9 309 aa4.06□□□□□ -1.76
NUP88-213ENST00000576862 BCL9LQ86UU0 1499 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 BCL9O00512 1426 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 RGPD2P0DJD1 1756 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 KDM3BQ7LBC6 1761 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 PKD1L3Q7Z443 1732 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 MAGEB16A2A368 324 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 A4D1N5 150 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 LRRIQ4A6NIV6 560 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ZNF724A8MTY0 619 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 GPR89AB7ZAQ6 455 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 MAGEB3O15480 346 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 PEX11AO75192 247 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 VENTXO95231 258 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ADCY5O95622 1261 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 GH1P01241 217 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 GPR89BP0CG08 455 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 PDHBP11177 359 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 EPS15P42566 896 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 SLC1A4P43007 532 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 PEX3P56589 373 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 YBEYP58557 167 aaPredicted RBP4.05□□□□□ -1.76
NUP88-213ENST00000576862 CTAG1AP78358 180 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 SLC3A1Q07837 685 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 TRDNQ13061 729 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 SNX1Q13596 522 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 INAQ16352 499 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ANKRD20A4Q4UJ75 823 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 SLC39A12Q504Y0 691 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ANKRD20A8PQ5CZ79 823 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 GLRA4Q5JXX5 417 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ANKRD20A2Q5SQ80 823 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ANKRD20A1Q5TYW2 823 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ANKRD20A3Q5VUR7 823 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 AADACL4Q5VUY2 407 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 LYPLAL1Q5VWZ2 237 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 TTC19Q6DKK2 380 aaPredicted RBP4.05□□□□□ -1.76
NUP88-213ENST00000576862 CENPPQ6IPU0 288 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 EMBQ6PCB8 327 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 OTOAQ7RTW8 1153 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 RABEPKQ7Z6M1 372 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 HOOK3Q86VS8 718 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 UNC5CLQ8IV45 518 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 SIAH3Q8IW03 269 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 KLHDC8AQ8IYD2 350 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ZNF274Q96GC6 653 aaPredicted RBP4.05□□□□□ -1.76
NUP88-213ENST00000576862 DHTKD1Q96HY7 919 aaPredicted RBP4.05□□□□□ -1.76
NUP88-213ENST00000576862 ERGIC2Q96RQ1 377 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 TRIM7Q9C029 511 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 MMADHCQ9H3L0 296 aaPredicted RBP4.05□□□□□ -1.76
NUP88-213ENST00000576862 CUEDC2Q9H467 287 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 IL1RAPL2Q9NP60 686 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 MED17Q9NVC6 651 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 AATFQ9NY61 560 aaKnown RBP eCLIP4.05□□□□□ -1.76
NUP88-213ENST00000576862 ZNF581Q9P0T4 197 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 ZNF319Q9P2F9 582 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 TP53TG3Q9ULZ0 132 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 LRP6O75581 1613 aa4.05□□□□□ -1.76
NUP88-213ENST00000576862 COL14A1Q05707 1796 aaKnown RBP4.04□□□□□ -1.76
NUP88-213ENST00000576862 KIAA1217Q5T5P2 1943 aa4.04□□□□□ -1.76
NUP88-213ENST00000576862 LRRD1A4D1F6 860 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms