RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SIRT3Q9NTG7 399 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 OLAHQ9NV23 265 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 FGFR1OP2Q9NVK5 253 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 ASF1BQ9NVP2 202 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMEM45AQ9NWC5 275 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 BTNL2Q9UIR0 455 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 CBLCQ9ULV8 474 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 VPS4AQ9UN37 437 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 FAF1Q9UNN5 650 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 PCDHGB3Q9Y5G1 929 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 SVILO95425 2214 aa11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 RP1L1Q8IWN7 2480 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF462Q96JM2 2506 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 FAM234BA2RU67 622 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANKRD33BA6NCL7 494 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ASPDHA6ND91 283 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR6C70A6NIJ9 312 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ACOT7O00154 380 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 HS6ST1O60243 411 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 CPSF4O95639 269 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ALOX5P09917 674 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF24P17028 368 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 NCF2P19878 526 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 UQCRC2P22695 453 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ATP4BP51164 291 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 POLR2JP52435 117 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 PNLIPRP2P54317 469 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 WNT3P56703 355 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 CORO7P57737 925 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 FBXW4P57775 412 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 KCNK10P57789 538 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ALDH6A1Q02252 535 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 PLGLB1Q02325 96 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ELOAQ14241 798 aaKnown RBP11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 SQLEQ14534 574 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 METTL21CQ5VZV1 264 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 LYPD8Q6UX82 237 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR10G3Q8NGC4 313 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 GPR151Q8TDV0 419 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 NUDT8Q8WV74 236 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC9A6Q92581 669 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 JADE3Q92613 823 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMBIM1Q969X1 311 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 TEX37Q96LM6 180 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 CCDC115Q96NT0 180 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 COL21A1Q96P44 957 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 PANX1Q96RD7 426 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 ACTRT3Q9BYD9 372 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 CXorf36Q9H7Y0 433 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 CHCHD2Q9Y6H1 151 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 CFAP46Q8IYW2 2715 aa11.75□□□□□ -0.53
TRAPPC1-206ENST00000573989 SHANK1Q9Y566 2161 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 DUXAA6NLW8 204 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 SNX4O95219 450 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANP32DO95626 131 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 HMGN2P05204 90 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 CCL3P10147 92 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 IL12AP29459 219 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 GABRA3P34903 492 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 CHI3L1P36222 383 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 DGKQP52824 942 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 ARFIP2P53365 341 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 GPR85P60893 370 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 KCNJ2P63252 427 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 SNTA1Q13424 505 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 LASP1Q14847 261 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 PRR30Q53SZ7 412 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 MFSD12Q6NUT3 480 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 PAOXQ6QHF9 649 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 NPSR1Q6W5P4 371 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 PACS2Q86VP3 889 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC22A16Q86VW1 577 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANKRD46Q86W74 232 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 CLECL1Q8IZS7 167 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 CPSF7Q8N684 471 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 COX18Q8N8Q8 333 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 GALNT11Q8NCW6 608 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR2M7Q8NG81 312 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 RFWD2Q8NHY2 731 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 SPPL2AQ8TCT8 520 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 ADAMTS15Q8TE58 950 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 NR4A3Q92570 626 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 MIB2Q96AX9 1013 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 DTNBP1Q96EV8 351 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 GIMAP5Q96F15 307 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC35A4Q96G79 324 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 FRMD6Q96NE9 622 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 TAAR6Q96RI8 345 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 STACQ99469 402 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 BARD1Q99728 777 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 DOHHQ9BU89 302 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMEM120AQ9BXJ8 343 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 METTL7AQ9H8H3 244 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 SH2D2AQ9NP31 389 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 DUSP22Q9NRW4 184 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 GIN1Q9NXP7 522 aa11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 BOKQ9UMX3 212 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC1-206ENST00000573989 PRRC2CQ9Y520 2896 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms