RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 A0A0A6YYD5 115 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 A0A0G2JPF8 293 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 HNRNPCL2B2RXH8 293 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 HNRNPCL3B7ZW38 293 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 RFXAPO00287 272 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 FRS3O43559 492 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 HNRNPCL4P0DMR1 293 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ADRB3P13945 408 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 AVPR1BP47901 424 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 TAS2R38P59533 333 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 NOGQ13253 232 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 INSL4Q14641 139 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 DHCR24Q15392 516 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 TMEM145Q8NBT3 493 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ZFAND1Q8TCF1 268 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 PINK1Q9BXM7 581 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 KIF26AQ9ULI4 1882 aaPredicted RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 CPSF4LA6NMK7 179 aaKnown RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 RPN2P04844 631 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 HSD17B2P37059 387 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 INPP1P49441 399 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ANXA11P50995 505 aaKnown RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 WSCD2Q2TBF2 565 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ZNF311Q5JNZ3 666 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 TIGD3Q6B0B8 471 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 SLC30A6Q6NXT4 461 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 RASSF6Q6ZTQ3 369 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 CADM2Q8N3J6 435 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ARIH2OSQ8N7S6 290 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 POGLUT1Q8NBL1 392 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 RFKQ969G6 155 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 C16orf58Q96GQ5 468 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 CAMK1GQ96NX5 476 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 DEFB118Q96PH6 123 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 TMEM43Q9BTV4 400 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 NT5DC2Q9H857 520 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 SLC13A4Q9UKG4 626 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 KCNE3Q9Y6H6 103 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ABHD14A-ACY1A0A1B0GW23 586 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 A0A1W2PPV9 198 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 SHISA3A0PJX4 238 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 STATHP02808 62 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 GZMKP49863 264 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 VASPP50552 380 aaPredicted RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 TRA2BP62995 288 aaKnown RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 CAMK2BQ13554 666 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 DSG2Q14126 1118 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 FAM214AQ32MH5 1076 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ZNF750Q32MQ0 723 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 KIAA1161Q6NSJ0 714 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 BHLHB9Q6PI77 547 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 ZNF793Q6ZN11 406 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 C12orf40Q86WS4 652 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 LIX1LQ8IVB5 337 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 CCDC116Q8IYX3 515 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 SMG7Q92540 1137 aaKnown RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 KLK6Q92876 244 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 OTUB2Q96DC9 234 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 SENP5Q96HI0 755 aaPredicted RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 FAIM2Q9BWQ8 316 aa14.69□□□□□ -0.06
NUP88-207ENST00000573584 DNMT3AQ9Y6K1 912 aaPredicted RBP14.69□□□□□ -0.06
NUP88-207ENST00000573584 C2orf92A0A1B0GVN3 265 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 GABRPO00591 440 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 MAN2B1O00754 1011 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 AKAP8O43823 692 aaKnown RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 GNSP15586 552 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 ATP6V1E1P36543 226 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 EPHA5P54756 1037 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 CSNK1G2P78368 415 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 NTHL1P78549 312 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 MESP2Q0VG99 397 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 TRAM2Q15035 370 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 CCDC58Q4VC31 144 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 MZT2AQ6P582 158 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 UPRTQ96BW1 309 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 ZG16BQ96DA0 208 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 COQ7Q99807 217 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 MENTQ9BUN1 341 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 TRIM45Q9H8W5 580 aaPredicted RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 CREBZFQ9NS37 354 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 SEMA4GQ9NTN9 838 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 GPR55Q9Y2T6 319 aaPredicted RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 LRIT2A6NDA9 550 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 PGRMC2O15173 223 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 ARHGEF9O43307 516 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 TRIM3O75382 744 aaPredicted RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 FAM157BP0CG42 384 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 ACP5P13686 325 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 CTBP2P56545 445 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 ZNF155Q12901 538 aaPredicted RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 ZNF791Q3KP31 576 aaPredicted RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 FNDC3BQ53EP0 1204 aaKnown RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 C9orf64Q5T6V5 341 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 KLHL36Q8N4N3 616 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 OR8D1Q8WZ84 308 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 NXPE3Q969Y0 559 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 MACROD1Q9BQ69 325 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 PITHD1Q9GZP4 211 aaPredicted RBP14.68□□□□□ -0.06
NUP88-207ENST00000573584 ING3Q9NXR8 418 aa14.68□□□□□ -0.06
NUP88-207ENST00000573584 CD8B2A6NJW9 211 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms