RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 NPIPA8P0DM63 369 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 PGCP20142 388 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 ARG2P78540 354 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 RAET1LQ5VY80 246 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 P4HA3Q7Z4N8 544 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 BMP8AQ7Z5Y6 402 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 VTCN1Q7Z7D3 282 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 PIK3R3Q92569 461 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 AMDHD1Q96NU7 426 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 TRIM2Q9C040 744 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 CLK4Q9HAZ1 481 aaKnown RBP9.48□□□□□ -0.89
SMG6-213ENST00000573166 ZC4H2Q9NQZ6 224 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 MUC6Q6W4X9 2439 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 FUCA1P04066 466 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 IFI30P13284 250 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 MERTKQ12866 999 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 RAPSNQ13702 412 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 NEDD8Q15843 81 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 IL20RBQ6UXL0 311 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 NANOGNBQ7Z5D8 188 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 SVOPQ8N4V2 548 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 NUDT8Q8WV74 236 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 TEX37Q96LM6 180 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 ADI1Q9BV57 179 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 TWSG1Q9GZX9 223 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 C11orf16Q9NQ32 467 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 FOLR1P15328 257 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 FPR1P21462 350 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 SSTR4P31391 388 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 DEFA1P59665 94 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 DEFA3P59666 94 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 TRA2AQ13595 282 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMG6-213ENST00000573166 PDSS1Q5T2R2 415 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 MMP21Q8N119 569 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 SFXN5Q8TD22 340 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 RORBQ92753 470 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 PHF21AQ96BD5 680 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 C16orf58Q96GQ5 468 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 OR10A5Q9H207 317 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 CHST8Q9H2A9 424 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 TVP23BQ9NYZ1 205 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 ZNF451Q9Y4E5 1061 aa9.48□□□□□ -0.89
SMG6-213ENST00000573166 H0YIG0 161 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 BLOC1S5-TXNDC5H3BN57 136 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 LILRB5O75023 590 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 PRG2P13727 222 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CD22P20273 847 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CBLP22681 906 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 PSMD7P51665 324 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 RPS6KA3P51812 740 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 RUNX1T1Q06455 604 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 GK3PQ14409 553 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 DCST2Q5T1A1 773 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CES4AQ5XG92 561 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 OPN5Q6U736 354 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 UBQLNLQ8IYU4 475 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 DTWD1Q8N5C7 304 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 OR7D2Q96RA2 312 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CDADC1Q9BWV3 514 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CXorf36Q9H7Y0 433 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CBLCQ9ULV8 474 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 PRKACGP22612 351 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 BSGP35613 385 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 DLSTP36957 453 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 RRADP55042 308 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 PER3P56645 1201 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 SYPL1Q16563 259 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 PIGGQ5H8A4 983 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 TMEM64Q6YI46 380 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 FUNDC1Q8IVP5 155 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 GHDCQ8N2G8 530 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 TOR1AIP2Q8NFQ8 470 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 OR4D9Q8NGE8 314 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 NETO1Q8TDF5 533 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 FER1L6-AS2Q96M78 137 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 PKP2Q99959 881 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 OR51V1Q9H2C8 321 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 FAM60AQ9NP50 221 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 ZNF225Q9UK10 706 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 SPAARA0A1B0GVQ0 90 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 FGF17O60258 216 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 GGT1P19440 569 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 TNFRSF1BP20333 461 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CDKN2CP42773 168 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CDH15P55291 814 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 DCAF7P61962 342 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 UBE2IP63279 158 aaKnown RBP9.47□□□□□ -0.89
SMG6-213ENST00000573166 BTG2P78543 158 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 EIF3IQ13347 325 aaKnown RBP9.47□□□□□ -0.89
SMG6-213ENST00000573166 DAG1Q14118 895 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 DGCR6Q14129 220 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 HES3Q5TGS1 186 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 CPZQ66K79 652 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 ANKFN1Q8N957 763 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 AQP11Q8NBQ7 271 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 ZNF354BQ96LW1 612 aa9.47□□□□□ -0.89
SMG6-213ENST00000573166 ZNF726A6NNF4 738 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 FBP2O00757 339 aa9.46□□□□□ -0.89
SMG6-213ENST00000573166 GALR2O43603 387 aaPredicted RBP9.46□□□□□ -0.89
SMG6-213ENST00000573166 SLITRK5O94991 958 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms