RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 SGCGQ13326 291 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 ARMC4Q5T2S8 1044 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 MRM1Q6IN84 353 aaKnown RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 SLC48A1Q6P1K1 146 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 TMEM53Q6P2H8 277 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 LAPTM4BQ86VI4 370 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 KCT2Q8NC54 265 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 NUP43Q8NFH3 380 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 FGF11Q92914 225 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 COL26A1Q96A83 441 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 SLC25A46Q96AG3 418 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 PINK1Q9BXM7 581 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 SEMA4GQ9NTN9 838 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 APOBEC3BQ9UH17 382 aaKnown RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CHST2Q9Y4C5 530 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 PCDHGA4Q9Y5G9 962 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 TFECO14948 347 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CASC3O15234 703 aaKnown RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 PRODHO43272 600 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CCNKO75909 580 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 ZIC2O95409 532 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 NR2F6P10588 404 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 ACADMP11310 421 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 F3P13726 295 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 FCARP24071 287 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 MPIP34949 423 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 ANXA11P50995 505 aaKnown RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 GAS1P54826 345 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CAV3P56539 151 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 OR2B6P58173 313 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 GNA13Q14344 377 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 RRM2BQ7LG56 351 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 C16orf62Q7Z3J2 963 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CAMKK1Q8N5S9 505 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 SCAIQ8N9R8 606 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 IL17RCQ8NAC3 791 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 SIMC1Q8NDZ2 872 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 OR56A1Q8NGH5 318 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 OR14C36Q8NHC7 312 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 TMEM163Q8TC26 289 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 ELP4Q96EB1 424 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 RSPH9Q9H1X1 276 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 POLMQ9NP87 494 aaPredicted RBP10.53□□□□□ -0.72
RPAIN-212ENST00000573126 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CES1P1Q9UKY3 287 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 CMAHPQ9Y471 501 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 SCN3AQ9NY46 2000 aa10.53□□□□□ -0.72
RPAIN-212ENST00000573126 A0A1W2PQ09 198 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 A0A1W2PQL4 384 aaPredicted RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 ISM1B1AKI9 464 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 UBXN7O94888 489 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 ALPPP05187 535 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 ACP2P11117 423 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 IL7P13232 177 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 CPEP16870 476 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 GSTM3P21266 225 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 SSTR4P31391 388 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 RCVRNP35243 200 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 GPR4P46093 362 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 BTN3A2P78410 334 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 DBPQ10586 325 aaPredicted RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 CRTC2Q53ET0 693 aaPredicted RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 C6orf132Q5T0Z8 1188 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 AGAP6Q5VW22 663 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 RSBN1Q5VWQ0 802 aaPredicted RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 RNLSQ5VYX0 342 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 TYW3Q6IPR3 259 aaKnown RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 FAM131AQ6UXB0 335 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 NKAIN4Q8IVV8 208 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 ZNF513Q8N8E2 541 aaPredicted RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 ANKK1Q8NFD2 765 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 OR4E2Q8NGC2 313 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 TMCO6Q96DC7 493 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 AGAP4Q96P64 663 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 SRRQ9GZT4 340 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 MKRN2Q9H000 416 aaKnown RBP10.52□□□□□ -0.72
RPAIN-212ENST00000573126 TRAPPC4Q9Y296 219 aa10.52□□□□□ -0.72
RPAIN-212ENST00000573126 IQCMA0A1B0GVH7 501 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 A0A1W2PQU0 124 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 GPR89AB7ZAQ6 455 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 C5orf67F2Z3F1 127 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 SLC31A1O15431 190 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 EMC8O43402 210 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 PROM1O43490 865 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 GUCY1B2O75343 617 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 CA3P07451 260 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 GPR89BP0CG08 455 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 GNSP15586 552 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 SOX18P35713 384 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 RFX2P48378 723 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 PDX1P52945 283 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 CLDN2P57739 230 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 SF3B4Q15427 424 aaKnown RBP eCLIP10.52□□□□□ -0.735e-17■■■■■ 28.1
RPAIN-212ENST00000573126 RPE65Q16518 533 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 C3orf38Q5JPI3 329 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 TJAP1Q5JTD0 557 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 SLC25A30Q5SVS4 291 aa10.52□□□□□ -0.73
RPAIN-212ENST00000573126 KIAA1211LQ6NV74 962 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms