RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 HTR1EP28566 365 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 MAGEA5P43359 124 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 HTR6P50406 440 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 FOXA1P55317 472 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 NRG3P56975 720 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 KCNJ2P63252 427 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 RAE1P78406 368 aaKnown RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 HMGCS1Q01581 520 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 SLC18A2Q05940 514 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ACSM2AQ08AH3 577 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 MGAT2Q10469 447 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 FOXO1Q12778 655 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 HEPACAMQ14CZ8 416 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 NTRK2Q16620 822 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ZNF630Q2M218 657 aaPredicted RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 GXYLT1Q4G148 440 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TRMT12Q53H54 448 aaKnown RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 SPIN4Q56A73 249 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 CFAP157Q5JU67 520 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 SPDYAQ5MJ70 313 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 PRAMEF20Q5VT98 475 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TMEM198Q66K66 360 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ACSM2BQ68CK6 577 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TMEM211Q6ICI0 200 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 FAM180BQ6P0A1 224 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TMEM64Q6YI46 380 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 BEND4Q6ZU67 534 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 NCCRP1Q6ZVX7 275 aaPredicted RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 FAM109AQ8N4B1 249 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TMEM251Q8N6I4 163 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ZNF441Q8N8Z8 693 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ADCY4Q8NFM4 1077 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 OR10G3Q8NGC4 313 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 OR5M3Q8NGP4 307 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 RDH11Q8TC12 318 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 C16orf78Q8WTQ4 265 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 PHF10Q8WUB8 498 aaKnown RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 DIO2Q92813 273 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ADIPOR1Q96A54 375 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 KLHL29Q96CT2 875 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 RCC1LQ96I51 464 aaKnown RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 ZNF681Q96N22 645 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 DMRTA2Q96SC8 542 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 C12orf65Q9H3J6 166 aaKnown RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 LDAHQ9H6V9 325 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ZDHHC11Q9H8X9 412 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 PROK2Q9HC23 129 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 SH2D2AQ9NP31 389 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 CHST11Q9NPF2 352 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 OXSMQ9NWU1 459 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 SIRT5Q9NXA8 310 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 MAT2BQ9NZL9 334 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 HEY2Q9UBP5 337 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 BCAP29Q9UHQ4 241 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ZNF639Q9UID6 485 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 UTS2RQ9UKP6 389 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 CFL2Q9Y281 166 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 CHCHD2Q9Y6H1 151 aaPredicted RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 EML6Q6ZMW3 1958 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 NAV2Q8IVL1 2488 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 TRGV5A0A0B4J1U4 118 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 A0A1B0GVC2 190 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 OR14I1A6ND48 311 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 CRCPO75575 148 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 BCAS2O75934 225 aaPredicted RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 CLDN14O95500 239 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 IL3P08700 152 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 RFPL3SP0C7P2 107 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 UROSP10746 265 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 NAGAP17050 411 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 GPX3P22352 226 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 TIA1P31483 386 aaKnown RBP eCLIP6.82□□□□□ -1.32
NUP88-205ENST00000572809 MPIP34949 423 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 GSTM5P46439 218 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 MAN2A2P49641 1150 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 TMED10P49755 219 aaKnown RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 FBXW4P57775 412 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 VSNL1P62760 191 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 RPP38P78345 283 aaKnown RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 DUSP2Q05923 314 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 IFFO1Q0D2I5 559 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 C2orf80Q0P641 193 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 EXOSC7Q15024 291 aaKnown RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 IMPG1Q17R60 797 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 EMC4Q5J8M3 183 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 LCE4AQ5TA78 99 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 LIPMQ5VYY2 423 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 GALNT18Q6P9A2 607 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 FRMD7Q6ZUT3 714 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 TRILQ7L0X0 811 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 PRR22Q8IZ63 422 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 SAMD14Q8IZD0 417 aaPredicted RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 C4orf33Q8N1A6 199 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 LRRC25Q8N386 305 aaPredicted RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 FBXW8Q8N3Y1 598 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 RIBC1Q8N443 379 aaPredicted RBP6.82□□□□□ -1.32
NUP88-205ENST00000572809 SIMC1Q8NDZ2 872 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 C17orf47Q8NEP4 570 aa6.82□□□□□ -1.32
NUP88-205ENST00000572809 OR2W6PQ8NHA6 318 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms