RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 SLC9A2Q9UBY0 812 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 WARS2Q9UGM6 360 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 KCNE5Q9UJ90 142 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 RIPK3Q9Y572 518 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 URGCP-MRPS24S4R325 110 aa4.61□□□□□ -1.67
TOPBP1-210ENST00000572787 KCNE1BA0A087WTH5 132 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 KBTBD11-OT1A0A1B0GTJ5 212 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 PRSS51A0A1B0GVH4 220 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 A0A1W2PPE3 182 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 HMX2A2RU54 273 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CCT8L1PA6NM43 557 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 ERI2A8K979 691 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 E5RI56 91 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MKRN2OSH3BPM6 223 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 KLRC4-KLRK1H3BQV0 150 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MID1O15344 667 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 OR2J3O76001 311 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 NDUFB4O95168 129 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 VAPBO95292 243 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CLDN9O95484 217 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TGFB1P01137 390 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CTXN2P0C2S0 81 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SMIM18P0DKX4 95 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 HAPLN1P10915 354 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 GOT1P17174 413 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TSPAN8P19075 237 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 RAB4AP20338 218 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 GATA3P23771 443 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 STX2P32856 288 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 UGT1A5P35504 534 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TMPOP42166 694 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 KIR3DL2P43630 455 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 OR3A3P47888 321 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 RFX3P48380 749 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 NPY2RP49146 381 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 STK19P49842 368 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 AP3S2P59780 193 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 RPL10AP62906 217 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 LCN2P80188 198 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 PSG6Q00889 435 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SPHARQ15513 63 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TIGD5Q53EQ6 642 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MIIPQ5JXC2 388 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 PRSS36Q5K4E3 855 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TCHHL1Q5QJ38 904 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MANEAQ5SRI9 462 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 FAM102AQ5T9C2 384 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 NAIF1Q69YI7 327 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF841Q6ZN19 808 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CPEB2Q7Z5Q1 589 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 POLNQ7Z5Q5 900 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 DHDDSQ86SQ9 333 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SERPINA11Q86U17 422 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SLC13A5Q86YT5 568 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MCOLN2Q8IZK6 566 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 IQCKQ8N0W5 287 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TBC1D19Q8N5T2 526 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CCNYL1Q8N7R7 359 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TMEM99Q8N816 258 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 Q8N9G6 341 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 C8orf31Q8N9H6 132 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 LINC01356Q8N9X3 169 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MFSD9Q8NBP5 474 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 RNF149Q8NC42 400 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CCDC197Q8NCU1 140 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CPEB3Q8NE35 698 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 RP9Q8TA86 221 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 HCAR2Q8TDS4 363 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TMEM239Q8WW34 195 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 NEU4Q8WWR8 484 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SMPDL3BQ92485 455 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 ZNF503Q96F45 646 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 PELI1Q96FA3 418 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CPB2Q96IY4 423 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CXorf58Q96LI9 332 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 JSRP1Q96MG2 331 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 OPALINQ96PE5 141 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CSPG4P5Q96PW8 444 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 NDNQ99608 321 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CCDC3Q9BQI4 270 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 RAB11FIP5Q9BXF6 653 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 TOLLIPQ9H0E2 274 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 C7orf69Q9H7B7 122 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 PPP1R3EQ9H7J1 279 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 Q9H8V8 135 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 VIPAS39Q9H9C1 493 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CNGB3Q9NQW8 809 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CYSLTR2Q9NS75 346 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SEMA4GQ9NTN9 838 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 USE1Q9NZ43 259 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 GNG12Q9UBI6 72 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 CLN8Q9UBY8 286 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MAN1B1Q9UKM7 699 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 PLA2G2DQ9UNK4 145 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 AFF2P51816 1311 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 MAPK8IP3Q9UPT6 1336 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 ATP10AO60312 1499 aa4.6□□□□□ -1.67
TOPBP1-210ENST00000572787 SMARCA2P51531 1590 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms